KEGG   Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_2824
Entry
Gdia_2824         CDS       T00798                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
gdj  Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gdj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Gdia_2824
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gdj02044]
    Gdia_2824
Enzymes [BR:gdj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Gdia_2824
Secretion system [BR:gdj02044]
 Type IV secretion system
  Trb secretion system protein
   Gdia_2824
SSDB
Motif
Pfam: T2SSE Zeta_toxin AAA_16 TrwB_AAD_bind AAA_19 FtsK_SpoIIIE DEAD AAA_30 nSTAND3 AAA_7 ResIII CbiA ABC_tran AAA_22 RsgA_GTPase AAA_28 TsaE AAA_29 SLFN-g3_helicase DUF87 ATPase DUF815 Sigma54_activat AAA_25 GTP_EFTU PIF1 Mg_chelatase P-loop_TraG IstB_IS21 AAA PduV-EutP Mur_ligase_C MMR_HSR1 MoCF_biosynth AAA_18 AAA_11 NACHT UvrD-helicase MobB Septin ABC_ATPase cobW RNA_helicase
Other DBs
NCBI-ProteinID: ACI52556
Position
3089215..3090204
AA seq 329 aa
MALAPLHSEAFSRGARMLRTALGPAIAAFLEDPSIVEVMLNPDGRLWIDRLSGGLEDTGR
TMSAADGERIVRLVAHHVGAEVHAERPRVSAELPETGERFEGLLPPVVTAPAFAIRKPAV
AVFTLDDYVAAGTMTAGQAASLREAVASRKNILVAGGTGTGKTTLTNALLAEIAGTSDRV
VLIEDTRELQCRAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTALGAIRRLEQLIQEAVVTVPKTLIAETIDLVAVLRGRGGERRLSE
LALIAGLDPATGDYRVQPAEAGGDLGDPS
NT seq 990 nt   +upstreamnt  +downstreamnt
gtggcacttgctccactccattccgaggccttctcacgcggcgcgcgcatgctgcgcacc
gcgcttgggcccgcgatcgccgctttccttgaagacccgtcgatcgttgaggtgatgctc
aatcccgacggtcggctctggatcgatcggctgtcgggaggcctggaggataccgggcga
accatgtcggccgccgacggcgagcggatcgtgcgcctggtcgcgcatcatgtcggcgcc
gaggtccatgccgagcgcccgcgagtctcggccgagctgcccgagacgggggagcggttc
gagggccttctcccacctgtcgtcacggctccggcttttgcaatccgcaaacccgccgtc
gccgtcttcacgctcgacgactacgtcgccgccggcaccatgaccgcgggccaggcagcg
tcgctgcgcgaggccgttgcctcccgcaagaacatcctggtcgccggcgggaccggcacc
ggcaagaccacgctcaccaacgcgctcctggccgagatcgcggggaccagcgatcgcgtg
gtgctgatcgaggatacgcgcgagctgcaatgccgcgcgccgaacctggtagcgatgcgg
accaaggatggggtcgcctcgctctccgacctggtccgctcgtccctgcgtctgcggccc
gaccgtatccccatcggtgaggtgcgcggcgccgaggcgttggatttgctcaaagcctgg
gggaccggacaccccggcgggatcggcacgatccacgccggcaccgcgctcggcgcgatt
cgccgcctcgaacagctcatccaggaagccgtcgtcaccgtccccaagacgctgatcgcc
gagaccatcgatctcgtcgcggtgctgcgcggccgcggcggcgaacgccgcctctccgaa
ctcgccctcatcgccggtctcgatcccgccaccggcgattaccgcgtccaacccgccgag
gcgggcggcgatctcggagacccctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (43)   
   Pfam (43)   
All databases (52)   

Download RDF
DBGET integrated database retrieval system