KEGG   Geobacter sp. M18: GM18_1928
Entry
GM18_1928         CDS       T01421                                 
Name
(GenBank) SMC domain protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
geb  Geobacter sp. M18
Brite
KEGG Orthology (KO) [BR:geb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:geb03400]
    GM18_1928
DNA repair and recombination proteins [BR:geb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GM18_1928
    Archaeal homologous recombinant proteins
     GM18_1928
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_15 AAA_27 AAA_29 SbcC_Walker_B ABC_tran SCO1-SenC Trimer_CC
Other DBs
NCBI-ProteinID: ADW13391
UniProt: E8WI90
Position
2318449..2321412
AA seq 987 aa
MRIVSVHLKNIKSHRDKELTFAPGINVLSGANGSGKSTIFEAIGYALFGVSAQDFVSKAE
RFLTIGAKRGEISVVFEPAAGELYRVTRTVGAAGKWLLAKENSGDFEVEEHANIQETETR
IATLLGLATGRSLADQFKLVIGPFQNDFLGPFVIKQPTKRQDAFDEILGIDAWRKTFDGT
KSLANTIAAKVETLQAEVAGKMEQVAVLPAKEEELQDLRAQGDAKQIELQSKLAESERVT
ALVTTLEAQKERIQAVQKEVQGLEERSESGRNYVTNQQLLVEQSLQAAAVVAEATAGKKG
YDAAEVKLRQLREEQQQKHLLEKKLAELEKEQGGLQAALGIETRELNETRTAIEAEGKRL
ADEEQAIALALAEQKRGELQATQGLDEANRGQLLFRELPMHGIETTLPYLYVALDRIEQI
DAQTAEREKLLAGSEALKAQAEDLAARQARLEQVQAQRSVLAGRKLSLVEGREKIGAGDC
PFFLEPCQNLKGADPAGLFDGRIAAIEAEMASLDRQASELAAQVSAAQQAVRELAGIDQV
SLELTKAGQEREKLEKEFSRTFAQIAPPALRVPLEEWLATAGFDGSFMAQVPVTEFDLAA
SPQLRRAALAAASHSWQSVVVKLEEALADRVKQAGEPVRQCALKLAELSARGEGLAAKQR
ELSVAREKATLREQAIGQHNARLATLKEGIAARKGEIGAFEGVEQAIKDAGEELVRFQSA
RDSYIANQKAAEDLGKHKETLAKYQTRLKEIATGLAGKQAELQKLTAEYHAEQHEAAKRD
QVSLVTAVATLKSEIGSVAEGVSRLEGETAALRAVAAEIDKKLAAIEELKEQANLVKFLR
NQVFKNVSAQLSERFREEISFRADRIYRSICESDEELYWGENYQVVLKDMVDGAVRERSD
DQLSGGQMMSAVVALRLALLQTIGARIAFFDEPTSNLDAERRENLAKAFRAIDVGQEEVT
EHWYDQLFLVSHDVSFTEITDQTTQLD
NT seq 2964 nt   +upstreamnt  +downstreamnt
gtgcgcatagtctccgtccacctgaagaacatcaagtcgcaccgcgacaaggaactcacc
ttcgctccagggataaacgtcctctccggcgcgaatggctccggcaagagcacgatcttc
gaggccatcggatacgccctgttcggcgtttccgcccaggacttcgtttccaaggcagag
cgcttcctcaccatcggcgccaagcgtggcgagatcagtgtggtcttcgagcctgcagca
ggggaactgtaccgtgtcacccgtaccgtgggggctgccgggaaatggctcctggccaag
gagaacagcggagatttcgaggtcgaggagcacgccaacatccaggagaccgaaacccgc
atcgcgaccctccttggccttgccaccggacggtcactcgcggatcagttcaagctggtg
atcggacctttccagaacgacttcctgggacccttcgtcatcaagcaacccaccaagcgg
caggatgccttcgacgagatcctggggatcgacgcctggcgcaaaaccttcgacggaacc
aagagtttggccaacaccattgccgcaaaggttgagaccctgcaggccgaggtggctggc
aagatggagcaggttgccgtgcttccggccaaggaagaggagctgcaggacctgcgtgcc
cagggtgatgccaaacagatcgagctgcagtcgaaacttgcagaatcggagcgggtcacg
gcgctggtcaccaccctggaagcgcaaaaggagaggatccaggctgtccagaaggaggtg
caggggttggaggagcgctccgaatccggcaggaactatgtcaccaatcagcagctcctg
gtcgagcagtcgctgcaggcggcagcggtggtcgctgaagcgaccgccggcaaaaagggg
tacgatgccgccgaggtgaagctcaggcagttgcgcgaggaacaacagcagaagcacctt
ctggagaaaaaactcgccgagctcgagaaggagcagggggggctgcaggccgcgctggga
atagagacccgcgagctgaacgagacgcggacggcaatcgaggccgaaggtaaacgcctc
gctgacgaggagcaagctattgccttggcgcttgccgagcagaaaaggggagagctgcag
gccacgcaagggctggatgaggcaaaccgcggccagctgcttttccgcgagcttcccatg
cacggcattgaaaccacgctgccgtacctgtacgttgcgctggaccgcatcgagcagatc
gacgcgcagaccgccgagcgagaaaagctgctggcggggagcgaggcgctgaaagcccag
gcggaagatctggcggcgcgccaggctcggctggagcaggtccaggcccagcgctccgta
cttgccggacgcaagctctccctggtggaggggcgcgagaagatcggggcaggggactgt
ccgttcttcctggaaccgtgccagaacttgaagggcgccgaccccgccgggctgtttgac
ggtcgtatcgctgcgatcgaggccgaaatggcttcgttggatcggcaggcgagcgaactg
gctgcacaggtgagcgcagctcaacaggcggttcgcgaacttgcggggatcgatcaggtt
tccctggaactgaccaaggcggggcaggagcgggagaagctggaaaaggaattcagccgc
acctttgcccagatcgctcccccggcgcttagggttccgcttgaagagtggctcgcaacc
gccgggttcgacggctcttttatggctcaagtacccgtcaccgagttcgacctggccgcg
tccccgcagcttcgccgggcagcgctggcggccgcaagccactcctggcagagcgttgtg
gtcaagctggaggaggcgctggcggatcgggtaaagcaggccggcgagccggtgcggcaa
tgcgccctgaagcttgccgagctttccgcgcgcggcgagggactggccgcgaagcagcgc
gagctctccgttgcaagggaaaaggcgactctgcgggagcaggcgatagggcagcacaac
gcgcgtctggccactctcaaggagggaattgcagccagaaagggcgagatcggtgccttt
gagggcgttgagcaggcgatcaaggatgccggcgaggagttggtgcgtttccagtccgcg
cgtgacagctacatcgccaaccagaaggctgcggaggacctcggcaagcacaaggagacg
ctggcgaagtaccagacccgccttaaagagattgctacagggctcgcaggtaagcaggcg
gaattgcagaagcttaccgctgagtatcatgcggagcagcacgaggcagccaaaagggac
caggtgtcgctggttacggctgtggcgacgctgaaatccgagatcggttccgtggccgag
ggggtgagccgtttggaaggggagaccgccgcgctgcgcgccgttgccgccgagatcgac
aaaaaactggccgccatcgaggaactgaaggaacaggcgaacctggtcaagttcctgcgc
aaccaggtgttcaagaacgtctccgctcagctctccgagcgcttccgcgaggagatcagc
ttccgtgccgaccggatctaccgaagcatctgcgagtccgacgaggaactttactggggg
gagaattaccaggtcgtgctcaaggacatggtggacggcgcggtccgggagcggagcgac
gaccagctttccggcgggcagatgatgagcgcggtggttgccctgcgcctggcgcttttg
cagaccatcggcgcccggatcgccttcttcgatgagcccacctccaacctcgatgcggaa
cggcgcgagaacctggccaaggctttccgcgccatcgacgtcgggcaggaagaggtcacc
gagcactggtacgaccagctcttcctggtcagccacgacgtgagcttcaccgagatcacc
gaccagaccacacaattagattaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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