KEGG   Geminocystis sp. NIES-3708: GM3708_243
Entry
GM3708_243        CDS       T04168                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
gee  Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:gee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gee03016]
    GM3708_243
Enzymes [BR:gee01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     GM3708_243
Transfer RNA biogenesis [BR:gee03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    GM3708_243
 Prokaryotic type
    GM3708_243
SSDB
Motif
Pfam: TruB_N TruB-C_2 TruB_C_2 DKCLD
Other DBs
NCBI-ProteinID: BAQ59837
UniProt: A0A0D6AAN7
Position
284210..285094
AA seq 294 aa
MDGFLNLNKPQNFTSHDCVAKLRKILKTKKIGHGGTLDPLATGVLPIAIGKATRLLQFLP
TGKAYQAKIRFGIVTTTDDLEGDIIKKTSAFDLTLEKITPYLQDFIGKIQQTPPAYSAIK
KEGKKLYELARKGEIIDIPKREVEITKIDILDWVNGEFPELDLQVFCGSGTYIRSIARDL
GEKLGTGATLSALNRTLSCGMIIENSLDFEDITSQKKTSDFKLINLDYPLENLSMINLNE
DESKRWCQGQKIVINNNVDNQFYRTYNYLCEFIGISELKMDENIKLIKPKVVIN
NT seq 885 nt   +upstreamnt  +downstreamnt
atggatggttttctaaacttaaataaaccgcaaaatttcacttctcatgattgtgttgct
aaattaagaaagattttaaaaaccaaaaaaatcggtcatggtggtactttagatccttta
gctacgggtgttttacccatcgccattggtaaagctactagattattacaatttttacca
acagggaaggcttatcaagctaaaattagatttggaattgttaccactaccgatgattta
gagggagatattatcaaaaaaacttcagcttttgatttaactttagaaaaaattactcct
tatttacaagattttatcggtaaaattcagcagactcctcctgcttatagtgccataaaa
aaagaaggtaaaaaattatatgaattggcgagaaaaggggaaataatagatataccaaaa
agagaagtagaaataactaaaattgatattttagactgggtaaatggagaatttcctgaa
ttagatttacaagtgttttgcggtagtggcacttatattagatctatagcgcgcgattta
ggagaaaaattaggtacaggtgcaactttatccgctttaaatcgaactcttagctgtgga
atgatcatagaaaatagcttagattttgaagatataacttcacaaaaaaaaacaagtgat
tttaaattaattaatcttgattatcccttagaaaatttatctatgataaatcttaatgaa
gatgagagtaaaagatggtgtcaaggacaaaaaatagttattaataataatgtagataat
cagttttatcgtacttataattatctttgtgagtttattggtatcagtgaattaaagatg
gatgaaaatataaaattaataaaaccaaaagtagttattaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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