KEGG T02366: GEI7407

Geitlerinema sp. PCC 7407: GEI7407_1014

Entry

GEI7407_1014      CDS       T02366

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

gei Geitlerinema sp. PCC 7407

Brite

KEGG Orthology (KO) [BR:gei00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gei03032]
    GEI7407_1014
   03400 DNA repair and recombination proteins [BR:gei03400]
    GEI7407_1014
Enzymes [BR:gei01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     GEI7407_1014
DNA replication proteins [BR:gei03032]
Prokaryotic type
  DNA Topoisomerases
   GEI7407_1014
DNA repair and recombination proteins [BR:gei03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GEI7407_1014

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 rve_3

Other DBs

NCBI-ProteinID:

AFY65512

UniProt:

K9S4F9

Position

complement(1208933..1210873)

AA seq 646 aa
MANEYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYCHQIQV
TLNADGSVSVTDDGRGIPTDVHPRTGRSALETVMTVLHAGGKFGGGGYKVSGGLHGVGVS
VVNALSEWVEVTVWRDRKVFKHRFERGVPIGEMSSEPYPEARTGTSLTFMPDVQIFTGGI
EFDYAILASRLRELAYLNGGVYISFTDSRLELLKSNEPKVEVYHYEGGIQEYIAYLNRDK
QPIHEEVIYVQGEREGVQLEVSLQWCVDAFTDNLLGFANNIRTVDGGTHLEGLKAVLTRT
MNSIARKRNRLKENESNLGGEHIREGLTGVISVKVPDPEFEGQTKTKLGNMEVRGIVESF
VGEVLTEYLNFRPGVADAILEKAIQAYNAAEAARRARELVRRKSVLESSTLPGKLADCSS
RDASESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALIT
ALGLGIKGEDFDSSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRSLVEQGYIYIACP
PLYKVERGRSHYYCYSDRELQGLIQREFPPNASYTIQRFKGLGEMMPTQLWETTMNPETR
TLKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSRLNLADLDI

NT seq 1941 nt +upstreamnt +downstreamnt
atggcaaatgaatacggtgctgatcagattcaggtcttagaaggccttgaaccggttcgc
aagcggccagggatgtacattggcagcacggggccccgaggactgcaccacctagtgtac
gaggtggtggataactccgtcgacgaagcgctcgcgggctactgccatcagattcaggtc
accttgaatgccgacggctccgtatcggtcacggacgatgggcggggcattcccacagac
gtccatccccgcacgggccggtctgccctcgaaaccgtcatgacggtgctgcacgcaggc
ggcaaatttggcggtggcggctacaaagtctcagggggtctccacggcgtgggggtttct
gtggtcaacgccctctccgagtgggtcgaggtcacggtttggcgcgatcgcaaggttttc
aagcatcgctttgagcggggcgttcccatcggggagatgagcagtgaaccctatccggag
gcccggactggcacatccctcaccttcatgcccgacgtgcagatttttaccgggggcatt
gagtttgactatgccattctagcgagtcgtctgcgggaattggcatacctcaacggcggt
gtctatatttcctttacggatagccgcctggaactgctcaagagcaatgagcccaaggtt
gaggtttaccactacgaaggcggtatccaagagtacatcgcttacctaaatcgggacaaa
cagccgattcatgaggaagtgatttatgtccagggtgagcgcgaaggcgtccagctagaa
gtctcgcttcagtggtgcgttgacgcctttaccgacaatcttttggggtttgccaataac
attcggactgttgacggcggcactcacctagaaggcctcaaagcagtgctgacccgcacc
atgaattcgatcgcccgcaagcgcaaccggctcaaggagaatgaatctaatctgggcggt
gagcacattcgcgaaggtctgacgggcgtaatctcggtcaaagttccagatcctgagttc
gagggtcagaccaagaccaagctcggcaacatggaagtgcgggggatcgtcgagtccttc
gtgggcgaggtgctcacggaatatctgaacttccggcccggcgtggcagatgccattctc
gagaaggccatccaggcctataacgccgccgaggccgcccgccgcgcgcgggagctggtg
cgacgcaagtcggtgctggagtcttcgacgctgccgggcaagctggccgattgcagctct
cgggatgccagtgagtctgagatcttcattgtggagggggactcggcaggcggctcggcc
aagcaagggcgcgatcgccgcttccaagccatcttgcccctgcgcggcaagatcctcaac
atcgagaaaaccgacgacgccaaaatctacaaaaacaccgagattcaggcgctgattacg
gctctggggcttggcatcaaaggcgaagactttgactcatcccagcttcgctatcaccgc
attgtcatcatgaccgacgcggacgtcgacggcgcccacattcgcaccctgctgctgacg
ttcttctatcgctaccagcgatcgctcgttgagcagggctacatctacatcgcctgcccg
cccctctacaaggtcgagcggggccgcagtcactactattgctacagcgatcgcgaactg
caaggcctcatccagcgcgaatttccgcccaacgccagctacaccattcagcgctttaag
ggtctcggcgaaatgatgccaacccagctctgggagaccaccatgaacccagaaacccgc
accctcaagcaagttgaaatcgaagacgccgccgaagccgatcggatctttacgattttg
atgggcgatcgcgttgctccccgacgagaattcatcgaaacctacggttctcgcctaaac
ctcgctgatctcgatatctag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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