KEGG   Geobacillus sp. JS12: A0V43_02740
Entry
A0V43_02740       CDS       T04412                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
gej  Geobacillus sp. JS12
Pathway
gej00300  Lysine biosynthesis
gej00550  Peptidoglycan biosynthesis
gej01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gej00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    A0V43_02740
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A0V43_02740
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:gej01011]
    A0V43_02740
Enzymes [BR:gej01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     A0V43_02740
Peptidoglycan biosynthesis and degradation proteins [BR:gej01011]
 Precursor biosynthesis
  Amino acid ligase
   A0V43_02740
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase MoCF_biosynth PGA_cap RraA-like Sulfatase DUF1611 YqeC
Other DBs
NCBI-ProteinID: AMQ20067
UniProt: A0A142CZ65
Position
535234..536703
AA seq 489 aa
MKLLTLLSHLPGFWVHHGGNPDIVALEMDSRRVAPGSLFFCLKGFTVDGHDFAEEAVARK
AAAIVAERPLSVDVPVVLVSDSRRAMAILADAFYGRPTHRLHLIGVTGTNGKTTTTSIIE
QIARKAGKKTGLIGTVHIKVGDRSYPAANTTPESLILQRTFKQMVDEGVEFVAMEVSSHA
LHQGRVHGCDYDVAVFTNLTQDHLDYHGTMEEYRNAKGLLFAQLGNRYDERRPKFAVLNH
DDPVSQYYKHMTAAPIVTYGMREKSDVMAEQIRMTAGGMAFRLCTPHGSAAVETKLVGSF
NVYNILAAAAACLASGFSLETIAAALADVEPVPGRFETVDEGQNFTIIVDYAHTPDSLEN
ALKTVRQLAKRNVYVVIGCGGDRDRSKRPLMAQVAVRYADVAIFTSDNPRSEDPQQILRD
MEAGVSAEVGKHVTIPDREEAIRYAIGQAQEGDVVLIAGKGHETYQIIGNDVIEFDDRAV
ARAAVKERG
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgaaactgctgacgctgctgtcacacttgcccggtttttgggtgcaccatggaggcaat
cccgatatcgtggcgctcgaaatggactcgcgccgcgttgcccccggttctctctttttt
tgccttaaagggtttacagtagacggacacgactttgccgaggaagcggtggcgcgcaaa
gcggcggcgatcgtggccgagcgaccgctttccgttgatgttcccgtcgttcttgtgtcg
gatagccggcgggcgatggcgattttagcggacgcattttacggacggccgacccaccgc
cttcatttaattggagtgacaggcacaaacggcaagacgacgacaacgtcgatcatcgaa
caaatcgcgagaaaagccggcaagaaaacagggctcattggcacggttcacatcaaggtc
ggcgaccgctcctatccggcggccaatacgacgccggagtcgctcattttgcagcgcacg
tttaaacagatggtcgatgaaggagtggagtttgtcgccatggaagtgtcgtcgcacgcg
ctgcaccaagggcgggtgcatggctgcgattacgatgtggccgtctttacgaacttaacg
caagaccatttggattatcacgggacaatggaagaatatcggaacgccaaagggcttttg
ttcgcccagctcggcaaccgctacgacgaacggcggccgaaatttgccgttctcaatcat
gacgatccggtttcgcagtattataaacatatgacggccgcgccgatcgtcacatacggg
atgagggaaaaaagcgatgtgatggcggaacagatccgcatgaccgcaggcggcatggcg
tttcggctgtgcacgccgcacggatcggcggcggtcgaaacgaaacttgtcggctcgttc
aatgtctataacattctcgccgctgccgctgcctgccttgcctctggcttttcgcttgaa
acgatcgccgcggcgcttgcggatgtcgagccggtgccgggtcggtttgaaacggttgat
gaagggcaaaactttacgatcatcgtcgattacgcccacacgccggacagtttagaaaat
gccttaaaaacggtgcgccaattggcgaagcgaaacgtgtatgtcgtcatcggctgcggc
ggcgaccgcgaccggtcgaaacgcccgctcatggcgcaggtggcggtgcggtatgcggat
gtcgctatttttacctccgacaatccgcgctcggaagacccgcagcaaattttgcgcgac
atggaagcgggagtaagcgctgaggtcggaaagcatgtgacgattcctgaccgtgaagag
gcgatccgctacgccattggccaggcgcaggaaggcgatgttgtgttgattgccggcaag
gggcatgaaacgtatcaaatcattggcaatgatgtgattgagtttgacgatcgtgctgtt
gcccgagcggcagtgaaggagagaggatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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