KEGG   Geobacillus sp. JS12: A0V43_11655
Entry
A0V43_11655       CDS       T04412                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
gej  Geobacillus sp. JS12
Pathway
gej03030  DNA replication
gej03430  Mismatch repair
gej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A0V43_11655 (dnaE)
   03430 Mismatch repair
    A0V43_11655 (dnaE)
   03440 Homologous recombination
    A0V43_11655 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gej03032]
    A0V43_11655 (dnaE)
   03400 DNA repair and recombination proteins [BR:gej03400]
    A0V43_11655 (dnaE)
Enzymes [BR:gej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A0V43_11655 (dnaE)
DNA replication proteins [BR:gej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A0V43_11655 (dnaE)
DNA repair and recombination proteins [BR:gej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A0V43_11655 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 DNA_pol_IIIA_C HROB
Other DBs
NCBI-ProteinID: AMQ21441
UniProt: A0A142D339
Position
complement(2381272..2384553)
AA seq 1093 aa
MMFVHLHVLSGYSLFQSAAAVEALAARAKQLGYQALALTDRNVLYGAIPFYRECKQNGIR
PIIGVTADVALSGEEAFPLVLLAANEEGYRHLLEISTMMQMGETKHMEEAALVRLSGGII
AITPGSEGRVESLVAAGEWERAKEALGRYHQLFPGRLYVAVQRGEQTRAPYEAGLLQLAE
ETGVPIVATNDVRYVERSDAVAWRCLQAIGRGALLADIEDDNGRYLAGPEEMARRFADLP
EALENSLAIADQCELQIEFGGWRLPAYPVPDGETADSYLRRLSEQGLARRVPSADERYWR
RLSHELDVIQSLHFSDYFLIVADVLAYARRRGILTGPGRGSAAGSLVAYALSITDVDPIK
YGLLFERFLNPERASVPDIDLDFPDDRREEVIRYVADKYGRDRVAQIITFGTFGAKAALR
ETAKALGVPGREAEQVAALLPSKQSVTLRQWHAESAAFRRAVAAVPQGREWLAVAQKLEG
LPRHTSIHAAGVIISPEPLVRFVPLQPSHGEWPLTQYAMGALEALGLLKIDFLGLRTLTL
IEQIVRLIERQTGKSFDIRTLPLDDEKTYALLGAGDTNGIFQLESSGMKRVLAELRPSEF
EDVVAVNALYRPGPMQMIPVYIRRKRGEEPIEYIHPDLAPILAPTYGVLIYQEQIMQIAA
RLAGFSLGQADVLRRAVAKKEKALLAKQRQAFVAGCVANGYPKAVAEELYRHIVRFADYG
FNRSHAVSYALLSYAMAYMKAHYPLCFYAVMLTNASGDREKAAVYYWEAARKGINVLLPS
VNKSVFRSFVEGSAIRLGLAMVKQVGSAAKLIVEERKANGPFADFFDFAARLLPKGLGRP
ALEALISVGAFDEFGADRASLLASIDIAIEHAQWVQALQAGGLSLKPKYAAAHSWPLSER
RRREAEFLGFAVTPHPAAVCRPLLQAAGAVCVADVQGPSTVVGGAVVRIRKTRTKQGEEM
AFFTVGDESGELEAVAFPNVYRRAADVLKEGQFVLLAGMIEVRGGRRQLIIRRAERLLVS
ALYINAGHALSDGPRLAALKQLLEQHHGSIPVYLYDEAKRKLLRLPERYAVDFTAPLVDE
LLSLFGAGRVAVK
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgatgttcgttcacttgcatgtgttgagcggatacagtttgtttcaaagtgcggcggcg
gtggaggcgcttgcagcgagggcgaaacagctcggctatcaagcgctcgcgctcacggac
cggaatgtgttgtatggcgctattccgttttaccgggaatgcaagcagaacggcattcgc
ccgattatcggcgtgacggctgatgtcgctctttctggggaggaagcgttcccgctcgtg
ctgttggccgccaatgaagaggggtatcgccatttgcttgaaatcagcaccatgatgcaa
atgggggaaacaaagcatatggaggaagccgctcttgtgcgcttaagcggcggcatcatc
gccatcactcccggaagcgagggacgcgtcgagtcgcttgtagccgccggcgaatgggag
cgggcgaaagaggcgcttggccgctatcatcagctgtttccaggacggctgtatgtcgcc
gttcagcgcggcgagcaaacgcgagccccatatgaagccgggttgttgcagctggcggag
gaaaccggcgtcccgatcgtggcgacgaacgacgtccgttacgtggagcgcagcgatgcc
gtggcgtggcgttgcttgcaggccatcggccgcggcgcgctgctcgctgacattgaggac
gataacggccgctatttggcggggccagaggagatggcgcgccggtttgcggacttgccg
gaggcgctcgagaacagcctggcgatcgccgatcaatgcgagttgcagatcgagtttggc
ggctggcggctgccggcgtatcccgttccggacggagagacggccgacagttatttgcgc
cgcttatcggaacaagggctcgcccgacgcgtgccgtcggccgatgagcgctactggcgt
cggctttcgcatgagctggatgtgattcagtcgcttcatttcagcgactattttttgatc
gtcgccgatgtgctcgcctacgcccgccgacgcggcatcttaaccggcccgggccgcggt
tcggcggccgggtcgcttgtcgcctacgcattgtcgatcaccgatgtcgatccgatcaag
tatgggcttttgtttgaacggtttttaaatccggagcgggcgtcggtgccggatattgac
ttggattttcctgatgaccggcgcgaagaagtgattcgctatgtggcggataaatacggg
cgcgaccgcgttgcgcaaatcattacgttcggcacgttcggcgccaaagcggcgctgcgc
gagacggccaaagcgcttggcgtccctgggcgggaggcggaacaggttgcggcgctcttg
ccgagcaaacaaagtgtgacgctccgccaatggcatgccgagtccgccgcttttcggcgc
gcggtggcagcggttccgcaagggagagagtggctggctgttgcgcaaaaactggaaggg
ctgccgcgccatacgtcgatccacgctgctggtgtcatcatcagcccggagccgctcgtt
cgcttcgtgccgctgcagccaagccatggcgaatggccgctgacgcaatacgcgatgggg
gcgcttgaagcgcttggattgctgaaaattgattttctcggtttgcgcacgctcacgttg
atcgagcagatcgtgcgtttgatcgagcggcagaccggaaagtcgtttgacatccgcacg
ttgccgcttgatgatgaaaaaacgtacgcgctgcttggcgctggagatacaaatggcatt
tttcagctcgaatcaagcgggatgaagcgcgtgctcgccgagctgcggccgtctgagttt
gaagatgtcgtcgccgtcaatgccttgtatcggccggggccgatgcaaatgatccccgtt
tacatccggcgcaagcgcggcgaggagccgattgaatacatccatcctgaccttgcgccg
attttagcgccgacatacggggtattgatctatcaagagcaaattatgcaaatcgccgcc
cggcttgccggattttcgctcggacaagcggacgtgcttcgccgggcggtggcgaaaaaa
gagaaagcgctgcttgccaagcagcgtcaggcgtttgtcgccggctgcgtggcgaacggc
tatccgaaagcagtcgccgaggaactgtaccgacacatcgtccgctttgccgattacggc
ttcaaccgaagccacgcggtcagctatgcgctgttgtcgtatgcgatggcgtatatgaaa
gctcattacccgctttgtttttatgcggtcatgctcaccaatgcctccggcgaccgagaa
aaagcggcggtgtactattgggaggcggcgcgaaaagggatcaacgtccttttgccgtcg
gtcaacaaaagcgtttttcgctcttttgtggaggggagcgccattcgccttgggctcgcg
atggtgaagcaagtcggctcggcggcgaagctgattgtcgaggagcggaaagcgaacgga
ccgtttgccgacttctttgatttcgctgctcgcttgctgccaaaagggctcgggcgcccg
gcgctcgaggcgctcatttccgttggggcgtttgacgagttcggtgcagatcgggcttcg
cttcttgccagcattgacattgcgatcgaacatgcgcaatgggttcaggcgctgcaagcc
ggagggctgtcgttaaaaccgaaatatgctgccgcacattcgtggcctttgtccgaacgg
cggcggcgggaagcggagtttcttggcttcgccgtcaccccccatccggcggcggtgtgc
cgcccgttgctgcaagcggcgggggcggtgtgtgttgccgatgtgcaaggtccgtcaact
gtggttgggggagcggtcgtccgcatacggaaaacgaggacaaagcagggtgaagaaatg
gcgtttttcaccgtcggcgatgagagcggggaattggaggcggtggcgtttccgaacgtt
taccgccgcgcggcggacgtattgaaagaaggacagtttgtattgcttgccggaatgatt
gaggtgcgcggcggacggcgtcagctcatcattcgccgcgccgagcgcctgctcgtgtca
gcgctgtatattaacgcaggccatgcgctatcggacggaccgcggcttgcggcgttgaag
cagctgctcgaacaacaccacggaagcattccggtttatttatacgacgaagcgaagcgg
aagcttctccgcctgccggaacggtatgcggttgacttcaccgcgccgcttgtcgacgaa
ttgctctctctattcggtgctgggcgcgtcgctgtcaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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