KEGG   Geminocystis sp. NIES-3709: GM3709_3735
Entry
GM3709_3735       CDS       T04142                                 
Name
(GenBank) type I restriction-modification system
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gen  Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:gen00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gen02048]
    GM3709_3735
Enzymes [BR:gen01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GM3709_3735
Prokaryotic defense system [BR:gen02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GM3709_3735
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: BAQ66970
UniProt: A0A0D6AWE2
Position
pGM3709_02:12210..15326
AA seq 1038 aa
MVSKTNEKALEDLIQECLIHQQGYHLGENKDFNPQIAVDTAKLWQFLETTQPEELDKLKY
NPDWQKIVLDRIDRKIKRNSLLPLLKKGLDIDSAHLTLFYSQPYNDLNPEIQANFQKNIF
SVTRQIHFSTTDKNLSIDLVIFINGLPIITIELKNQWTNQTVYDAKKQYCGRDYQQPLLN
FGRCLVHFALDTDEAWMTTRLNGKSTYFLPFNQGNNNGKGNPINPHGHKTSYLWEDVLSR
SSLANILEHFVLLEGNSTDALKEKTLIFPRYHQRDVVNKILLSAQINGTGKTYLIQHSAG
SGKSNSITWLAFQLIQLYPLPLAKVNNFTTNQNNNQSSQQVYNSTANQNNNHKSTNKTDI
PLDEPLFNSVIVVTDRTNLDKQLRDNIKDFSEVKNIIAHAKTSEELKNALETGKKIIITT
IQKFRFIVEGIEGLSNKRFAVIIDEAHSSQSGTSADTLNMTINKTNDNDDTEEEIPEDNQ
DKILEVMKNRKLSKNASYFAFTATPKNSTLEKFGIRQSDGSFLPFHLYSMKQAIEEGFIL
DVLANYTTYKSYYEIQKSIIDNPEFDTSKAQKKIKAFVEAHPKTIATKAEIMVNHFLENV
VKPKKMKGEARGMVVTKNITTAIIYYQEIQKLLKENNADFQAIIAFSGKKKVNGIEHTEE
SLNGFPSKDIESKLRTDDYRLLVVANKFLTGFDEPLLHTMYIDKKLTGVLAVQALSRLNR
CNNKMGKNDTFILDFVNSTTEIKQAFDPFYTATSLTEATDINVLHDLKESLDGLGVYEIY
EVNQFNQLFFAQVEAEQLSPIIDTAAQRFNSDLQLTEEDKIDFKIKAKQFVKVYAQLACL
IPFDNLDWEKLHWFLKFLIPKLIVKNPQQDQLDELLNSIDLSTYGIERVTLNSQIELRDE
QGELKAQNPNPRGYYEQEKEYNTLDEIINSFNQAYFGQWEATPEEQKIKLVNIAQNVANN
PDYQTQVVNNPDPQNSRMAIDRLIKQAVNRERQKEVTLYRNYMQDPDFQLALNNSIMRIL
EATLTNSNINLDNMKFGS
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggtaagcaaaactaatgaaaaagccctcgaagacttgatacaagagtgtctcatccat
caacaaggctatcacctcggagagaataaagactttaacccccaaatcgccgttgatacc
gccaaactatggcaattcctcgaaaccacccaacccgaagaattagacaagctaaaatat
aaccccgattggcagaaaatagtattagataggatcgatcgaaaaatcaagagaaatagc
cttttaccccttctcaaaaaaggcttagatattgattcagcacatctcaccctattttat
agccaaccctacaacgacttaaacccagaaatccaagccaacttccagaaaaacatcttt
tctgttacccgtcaaattcacttttctaccaccgacaaaaacctctccatagacttagta
atatttatcaacggcttacccatcataaccattgaattaaaaaatcaatggacaaatcaa
accgtttacgatgctaaaaaacaatactgtggaagggattaccaacaaccattattaaac
ttcggacgctgtttagtacattttgcccttgataccgatgaagcatggatgacaaccaga
ctaaatggcaaaagcacctattttctacccttcaaccaaggaaataacaacggtaaaggc
aaccccataaaccctcatgggcataaaactagctatctctgggaagacgttttaagcaga
agtagtttagccaatatccttgaacattttgtcttattagaaggtaattcaacagatgcg
cttaaagaaaaaacccttatcttcccccgttaccaccaacgagacgtagttaataaaatc
ctgctatctgctcaaattaatggcactggtaaaacctatctgattcaacactccgcaggt
tcaggaaaatctaattctatcacatggttagcctttcaactaatccaactctatcccctt
cccctcgccaaagttaataactttactactaaccaaaataataaccaatcatcacagcaa
gtttataactcgactgctaaccaaaataataaccataaatctaccaataaaacagatatt
ccattagacgagcctttatttaactctgtaatagtagtaacagatagaactaatttagat
aaacaactgcgggataatattaaagacttttccgaagttaaaaacattatcgcccatgcc
aaaacctccgaagaactcaaaaacgcccttgaaacaggcaaaaaaatcattatcactacc
attcaaaaatttagatttattgtcgaaggcattgaaggattaagtaataaacgctttgcc
gtaattatcgatgaagcccactccagccaaagcggtacttctgctgatacccttaacatg
acaatcaataagactaatgacaatgatgacacagaagaagaaatccccgaagataatcaa
gataaaatcttagaggtaatgaaaaaccgcaaattaagtaagaatgcctcttattttgcc
tttactgccacccctaaaaatagcacccttgaaaaatttggcatcagacaaagcgacggt
agttttttaccctttcatctctattccatgaaacaagccatcgaagaaggttttattctt
gatgttttagccaattataccacctataaaagttactacgagatccagaaatccattatc
gataaccccgaatttgataccagtaaagcccagaaaaaaatcaaagcctttgtggaagcc
catccgaaaacgatcgccaccaaagccgaaatcatggttaatcacttcttagaaaacgtg
gttaaaccgaagaaaatgaaaggggaagcgagggggatggtagtaaccaaaaatattacc
acagcaattatttattaccaagaaatacaaaaactgctcaaagagaataacgccgatttt
caagctattatcgccttttcgggcaaaaagaaggtaaatggtatcgaacacaccgaggag
agcttaaacggctttcctagtaaggatatagaaagcaaattgcgcaccgatgactaccgc
ttgttagtggtagcgaataagtttttaacgggctttgacgaaccattattacacaccatg
tatattgataaaaaattaactggggttttagcagtacaagccctatcccgtctcaaccgt
tgtaataataaaatgggtaagaatgatacttttatcctcgactttgttaacagcaccaca
gagataaaacaagcctttgaccccttttatactgccaccagcctcacggaagcaaccgat
ataaatgtactccatgacttaaaagaaagtttagacgggttaggggtgtatgaaatttat
gaggtaaaccagtttaaccagttattttttgctcaggtagaagcggagcaactaagcccc
attatcgatactgccgcccaaagatttaacagcgatttacagctaacggaagaagacaaa
atcgactttaaaattaaggcaaaacagtttgttaaggtatatgcccaattggcttgtttg
attccttttgataaccttgattgggagaaattacattggtttcttaaattcctcatccct
aaattaatcgttaaaaatcctcaacaggatcaactagatgaattactcaatagtattgat
ttaagtacctacggcattgaaagagttacccttaacagtcagatcgagctcagagatgaa
cagggggaattaaaagcgcaaaaccctaatccgaggggatattatgagcaggaaaaggaa
tataacaccctcgatgaaattatcaatagctttaaccaagcctactttggacagtgggaa
gccactcccgaagaacaaaagataaaattagtgaatatcgcccaaaatgtcgctaataac
cccgattatcaaacccaagtagtcaataatccagatccccaaaatagtaggatggcgatc
gatcgtctaattaaacaagctgtaaacagagaaagacaaaaagaagtaactttgtataga
aattatatgcaagatccagattttcaactagccttaaacaatagcatcatgcgtatctta
gaagctacattaactaactctaatattaatcttgataatatgaagtttggctcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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