LOCUS MN379632 4728 bp DNA circular PHG 04-APR-2020
DEFINITION Chicken microvirus mg4_207, complete genome.
ACCESSION MN379632
VERSION MN379632.1
KEYWORDS .
SOURCE Chicken microvirus mg4_207
ORGANISM Chicken microvirus mg4_207
Viruses; Monodnaviria; Sangervirae; Phixviricota;
Malgrandaviricetes; Petitvirales; Microviridae; Microvirus.
REFERENCE 1 (bases 1 to 4728)
AUTHORS Chrzastek,K., Kapczynski,D., Kulkarni,A., Chappell,L., Schmidlin,K.
and Varsani,A.
TITLE Identification of single stranded DNA viruses in chicken tracheal
swab swabs
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4728)
AUTHORS Chrzastek,K., Kapczynski,D., Kulkarni,A., Chappell,L., Schmidlin,K.
and Varsani,A.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2019) The Biodesign Center of Fundamental and
Applied Microbiomics, Arizona State University, 1001 S. McAllister
Ave, Tempe, AZ 85287-5001, USA
COMMENT ##Assembly-Data-START##
Assembly Method :: metaSPADES v. 3.12.0
Sequencing Technology :: Illumina
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4728
/organism="Chicken microvirus mg4_207"
/mol_type="genomic DNA"
/isolate="mg4_207"
/isolation_source="tracheal swab"
/host="Gallus gallus"
/db_xref="taxon:2720916"
/country="USA"
/collection_date="2017"
CDS join(3987..4728,1..11)
/note="similar to PHA00330"
/codon_start=1
/transl_table=11
/product="replication initiator protein"
/protein_id="QIR82303.1"
/translation="MLEGFCHPSSLFVTLTYSPEFLPEGGTLVKRHLQLFLKRLRKNL
SPLRFRYYAVGEYGEKFSRPHYHLILYGLSQSHVLAVRRAWTDPTTGSPIGLVHVGNG
QRLSYQYVAGYVTKKYVKKSDNFVPEFATMSRRPGIGYPALEKVQLLMNNPVFQKMVH
IDQDVPKGLMHGQKWWPFGRYLVEKLRQMIESGWTDEKWYAEIRQKYIEHLASCDERV
FFERMQDETKQQIINLEAKERLFAQKRRFHAS"
CDS 1..1539
/note="similar to PHA00363"
/codon_start=1
/transl_table=11
/product="major capsid protein"
/protein_id="QIR82302.1"
/translation="MPRKRMRRRSTFGLSHYRLFSAKMGYIYPIACYEVLPGDTFRQS
TSLFLRLAPLVTPVMHPVHVKIHSWYVPYRLLWEDWEDFRTRGPEGTDASEVPYITAP
SGGFPVGSLADYLGIPTGIEGLTVNAFAFRAYNYIWNENYRDERVQDELPWVMTGGAD
TTTSTALVPSPWGRDYFTTASPTPQTGPEVTIPVNMGDAGTPTLTGTVRGNGVPTFNT
PSASVPAGGLNAGSSGSPSSDVTLSRAGQSGSFQPLTWKDPKLSVDIEYQPGEASIGS
INIADWREAMAMQKFEETRSLWGARYNEFLMDMGIRPSDARLQLPEYLGGGRQTIQFS
EVLQTAPGGEDPVGALKGHGIGAMRTNRFRRFFEEDGIVLTFAMVRPIGIYMQGLHKM
WSRRSFAEFYNYQFEHLSQQPVYTRELYAGVADKDKVFGYQNIYDDYRSIPSQVSGEM
RTVLNSWHMARDFSNEPVLNGDFITSPPTNRIFAAQENDTLYCMAHHTIHSRRLLPRF
GDPR"
CDS 1578..1928
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="QIR82301.1"
/translation="MAHINEFGQEVLDQTPKCLPVPFQHRELTIFDRIQMQLAAFKRE
NAPDETAEDMLDFGEDRDDYPDFESYPSAAEMAEQRTRRVLESKPKPKPEPEPKPKPK
PEPEPKPEPPVDGE"
CDS 2046..2504
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="QIR82300.1"
/translation="MSKRRRRKQATPTHSPSTYRHRQTRDLKLIARHRRDYPRRAGVL
QSIKRLVEPSPLTNLREVEDLRSTKHVRKGRFVRNDGTPAGTRYKPVHNRVHGLFQGM
HLSFSEPQKTAVCIRRRSRRRVLFALQKAGKGKRPTRRPRWTEKSYIRCK"
CDS 2575..3435
/codon_start=1
/transl_table=11
/product="DNA pilot protein"
/protein_id="QIR82299.1"
/translation="MPWGGIVSGIGAAVGGIAGLIGSRQSQANAAALNKFNYEAQKEF
AQNGIRWRVADAKAAGLHPLAALGASTASYSPSAVIGDSPDYSFLKDMGQGIGRAMDA
KATQRERDEKEEKSNALFNEELKGKQLQNQETETRIQQMKWDMAMDAARNAERSVRTQ
QQVPAMPSLAPDGSLMPGQSNATSPGGIESKPAEIVVNEPGRPAQERGSITELGFLRT
SDGGYQPVMSNDAKNRLEEDIAGTFAWNRRNRLSAWFDLDRAKPPKAWLPAGKNDWSY
DIMAGAWYPE"
ORIGIN
1 atgcctcgta agcgtatgcg gagacggtct actttcggcc tctcccatta tcggttgttt
61 tcggccaaga tgggttatat ctatcccatc gcctgctatg aggtgcttcc cggtgacaca
121 ttccggcaaa gcacttctct ttttctccgg ctcgctcccc tcgttacccc ggtgatgcat
181 ccggtgcatg tcaagattca ttcgtggtat gttccctatc gtcttctgtg ggaagactgg
241 gaagatttcc gcactcgtgg ccccgaaggc actgacgcca gcgaagttcc gtatatcact
301 gctccgtcag gtggctttcc cgttggctct ctcgctgact atctgggcat tcctactggc
361 attgaaggtc tgacggtgaa tgcgtttgcg ttccgtgcct acaattacat ctggaatgaa
421 aactatcgtg atgagcgtgt ccaggatgaa cttccttggg ttatgactgg tggagctgat
481 accactacgt ctaccgctct ggttccgtct ccgtgggggc gtgattactt cacgacggct
541 tcccccactc cccagactgg cccggaagtg accattcctg ttaatatggg cgatgctggt
601 acgcctacct tgacgggtac ggttcgcgga aatggcgttc ctacgtttaa cactccgtct
661 gcgtctgttc ccgctggtgg ccttaatgct ggatcttctg gcagtccttc gtcggatgtt
721 actcttagtc gtgctggaca gtctggttct tttcagccgt tgacgtggaa agatcccaag
781 ctctcggtcg atattgagta tcagcccggt gaagcctcca tcggctctat caacatcgcc
841 gactggcgcg aagcgatggc gatgcaaaaa ttcgaggaaa cccgttccct ttggggtgct
901 cgctacaatg agttcctcat ggacatgggt atccgcccct cggatgctcg tctccagctg
961 cctgaatatc tcggcggtgg tcgccagact atccagtttt ccgaggttct gcagaccgct
1021 cccggtggtg aagaccctgt cggtgctctc aaaggccacg gcatcggtgc catgcgtacc
1081 aatcgcttcc gcaggttctt cgaagaagat ggtatcgtgt tgaccttcgc catggtgcgc
1141 cccatcggca tttacatgca gggtctccat aaaatgtggt ctcgccgctc gtttgccgag
1201 ttctacaact atcagttcga acacctttct cagcagcccg tttatactcg tgagctgtac
1261 gccggtgtcg ccgacaaaga caaggttttt ggttatcaga acatttacga tgattaccgg
1321 agcattcctt ctcaggtttc tggtgaaatg cgtactgttc tgaattcttg gcatatggcc
1381 cgtgacttct ccaatgagcc cgtgcttaat ggggatttca tcacctcacc tcccaccaat
1441 cgcatttttg cggcgcaaga aaatgatacg ctttactgca tggctcatca tactatccat
1501 tctcgccggt tgctcccccg tttcggtgat ccgcgatagc aacgttaaag ttgataagaa
1561 aacggaggtt tctcttcatg gctcatatca acgaattcgg acaggaagtg ctggatcaga
1621 cgccgaagtg tctcccggtt ccgtttcaac atcgggaact gacgatcttc gacaggatac
1681 agatgcaact ggcggctttt aagcgggaaa acgctcccga tgaaacggct gaggacatgc
1741 tcgattttgg cgaagatcgg gatgattacc cggacttcga gagctacccc tccgctgctg
1801 aaatggccga acagcgcacg aggcgcgtgc ttgaatccaa gcccaagccc aagcccgaac
1861 ctgaacccaa gcctaagccc aagcctgaac ctgaacctaa gcccgaaccg cccgtagacg
1921 gcgaataagg cgcgctaggg aggtggattt gtccacctcc cgacacgcgc aaccgggcgc
1981 agcccggctc agcacagtac cccccttgat gtgtactgtg ctgagtgaca ccaacggtgg
2041 tcacgatgtc caaacgtaga agacgtaaac aggccactcc cacacactcc ccctctactt
2101 acagacatag gcaaacacgc gatctcaaat tgatcgctcg gcaccggcgc gactatccgc
2161 gccgggccgg tgttttgcaa tctatcaaga ggctcgtcga gccgtcccca ttaacgaatt
2221 tacgagaggt tgaagatctc aggagtacta agcatgttcg caaaggaaga tttgtacgta
2281 acgatggaac ccctgccgga actcggtata aacctgtaca caatcgagtg cacggcttgt
2341 tccaagggat gcacctttca ttttcggaac cacagaaaac tgccgtttgc attcgtcgcc
2401 gatctcgtcg ccgcgttctc ttcgccttgc agaaagctgg aaaaggaaaa cgcccgacgc
2461 gccgccctcg atggacagaa aagtcttata tccgatgcaa atgatggttg ggctgatcct
2521 gccatttctt cttgtggagt ctttactact catgatggag attaaggagt acttatgcct
2581 tggggcggaa ttgtttctgg tattggtgct gccgttggtg gtattgctgg ccttatcggc
2641 tctcgccagt ctcaggccaa tgcagccgct cttaataagt ttaattacga agcccaaaag
2701 gagttcgcac aaaatggcat tagatggcgc gtcgcagatg cgaaagcggc gggcctccat
2761 cctctcgctg cgctcggtgc atcgactgcg tcttactcgc ctagcgccgt aattggcgat
2821 tccccggact attcctttct caaggacatg ggacaaggca taggccgtgc catggatgct
2881 aaggctactc agcgtgagcg tgacgaaaaa gaagaaaaga gcaatgccct ctttaatgaa
2941 gagctgaaag ggaagcagct ccagaatcag gagactgaaa ctcgcatcca gcagatgaaa
3001 tgggatatgg cgatggacgc cgctcgcaat gctgaacgtt ccgtgcgtac ccagcagcag
3061 gtgcccgcta tgccttctct tgccccggat ggctccttga tgcctggtca atctaatgct
3121 acatctcccg gaggcattga atctaagcct gctgaaatcg tggtcaacga gcccggcagg
3181 cctgctcagg agcgtggatc tatcacggag cttggttttc tccgtacctc cgatggtggc
3241 tatcaacctg ttatgtcgaa tgatgccaag aaccgactgg aggaagatat tgcaggcaca
3301 tttgcttgga atcggcgcaa tcgtttgtct gcttggtttg acttggatcg cgctaagcct
3361 cctaaggcgt ggctccccgc tggcaaaaat gattggagtt atgatatcat ggccggtgct
3421 tggtatcctg agtagtttga tttaatgact ggacattatg ggacatttgg tgctaagtat
3481 ttcttacgcg gttctttgaa aatctcatag ggaaacttcg gaacttaatc ctttaacttt
3541 taggaggttt ttgtgcggct ttttcgtctt tcgcttggtc tagttgtgac cgaggaaaac
3601 ttgttcagtt actatcgccg gattattctt ggccgtctgg gtgaaactat catgttcccg
3661 gaatggctta accgtatcaa cgctcaggag gtgcgctaat ggcttatcgt cgtcgtcgtc
3721 gtcgtggtcg tttccgccgt cgtcgcatcc gttccgtgtt ccgccgtcgt ggcggtattc
3781 gtatgtgagg ttaaggatgt ttgctctgta agagtccgtt tattcgtgac aggtctggcc
3841 gtctctacaa ggcggccatt ctttccaatg aagcgtttaa ggccactgat cttgggaagg
3901 agcttttgct ttcaggccag ccattcccct gtgggcaatg cctgccgtgt cgtatcaata
3961 agcggcgtgt ctggacccat aggctgatgc ttgaaggctt ctgccatcct tcttctttgt
4021 ttgtcacctt gacttattcg ccggaatttc tgcccgaagg aggtacgctt gttaagcggc
4081 atttgcagct tttccttaaa agacttcgga agaatctttc cccactacgt ttccgatatt
4141 atgctgttgg agaatacgga gaaaaattta gtcgtccgca ctaccatctt attctctacg
4201 gtttatccca atcacacgtc cttgctgttc gtcgcgcttg gacagacccc acaactggct
4261 cgccgattgg attggttcat gttggaaatg gccaaaggct ttcatatcag tacgttgccg
4321 ggtatgttac gaagaagtat gttaagaaat cagataactt cgtacccgaa tttgcaacga
4381 tgtctcgacg gcccggtatc ggctaccctg ctctcgaaaa agttcaattg ttgatgaata
4441 atcctgtgtt ccagaagatg gttcatatag atcaggatgt gccaaaaggc ttgatgcatg
4501 gtcaaaaatg gtggcccttt gggcgttacc ttgttgagaa gctacggcaa atgattgaat
4561 caggttggac ggatgaaaaa tggtatgccg aaattcggca aaaatacatt gaacatctgg
4621 cctcctgcga tgaacgtgtc ttctttgaac gaatgcagga tgaaacaaag caacagatca
4681 taaatctgga agcaaaagaa cgcttgtttg cccagaaaag gaggttcc
//
