LOCUS MN379645 4253 bp DNA circular PHG 04-APR-2020
DEFINITION Chicken microvirus mg7_25, complete genome.
ACCESSION MN379645
VERSION MN379645.1
KEYWORDS .
SOURCE Chicken microvirus mg7_25
ORGANISM Chicken microvirus mg7_25
Viruses; Monodnaviria; Sangervirae; Phixviricota;
Malgrandaviricetes; Petitvirales; Microviridae; Microvirus.
REFERENCE 1 (bases 1 to 4253)
AUTHORS Chrzastek,K., Kapczynski,D., Kulkarni,A., Chappell,L., Schmidlin,K.
and Varsani,A.
TITLE Identification of single stranded DNA viruses in chicken tracheal
swab swabs
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4253)
AUTHORS Chrzastek,K., Kapczynski,D., Kulkarni,A., Chappell,L., Schmidlin,K.
and Varsani,A.
TITLE Direct Submission
JOURNAL Submitted (26-AUG-2019) The Biodesign Center of Fundamental and
Applied Microbiomics, Arizona State University, 1001 S. McAllister
Ave, Tempe, AZ 85287-5001, USA
COMMENT ##Assembly-Data-START##
Assembly Method :: metaSPADES v. 3.12.0
Sequencing Technology :: Illumina
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4253
/organism="Chicken microvirus mg7_25"
/mol_type="genomic DNA"
/isolate="mg7_25"
/isolation_source="tracheal swab"
/host="Gallus gallus"
/db_xref="taxon:2720927"
/country="USA"
/collection_date="2017"
CDS 1..1812
/note="similar to PHA00363"
/codon_start=1
/transl_table=11
/product="major capsid protein"
/protein_id="QIR82372.1"
/translation="MAIKRYAHNLSHNVTGTVNMGLNYPVDIMEVFPGDSFRITAKNL
SRFMPQIAPTTSDVFAGFDFYDVPLRQLCELVGINWDKYLTGGQNGTDMIQAPTITIP
ESGYEPGSLADWLGFPTNYMDPSTNQKVVVGAGLVFDAWPVIAYMHIIDSNYLDQNFI
QHLDFTKYQEFLDGTYQFKDAQGNLIDYDILVDGIFPKAWSRDYFGRAMSNTQRGPVV
NVPVGETADLQPNVAPIVTGGYYTPSVTTTLTLKGKTTAIPGVSVTGSDFSYSFVAGN
IVGSTVVLNKDVSYGVNDSVRIVFTGDNTYKFQELLTNGQWQDVPDISALWDVSLSPV
GNINGTLGTGNIADLSKVSANLLNATGISLIAFRTAARMQRFGEILQQAGARAVEYTM
AFFGVRVPDGRAQRPIFHGSFNMPVVFSEVLQTSQTTDTAPLAYMAGHGITGGVNRPI
HIKCIEHGYIVVIGHFMPRSQYQQYIPKYLLRFNRMDIPNPLFQHIGEQAVLRKEIYP
NSANPDDTFGYVPRYTELTTIPSVLRGHMKDTFLHWSMARVYNSEPVLSAAWRYEKPS
NRSFSVPDEDQIVMSVGFDIQARRVFKRNPNPGIHIV"
CDS 1825..2445
/note="similar to PHA00327"
/codon_start=1
/transl_table=11
/product="DNA pilot protein"
/protein_id="QIR82370.1"
/translation="MDPILGAAALTGVSNLASNLFNIGSVNRANKQNLQIAREQMAFQ
ERMSNTAVQRYAKDLEAAGFNRLLAAGGNSASTPSGASASMSPAKLTPIDIMALEQAR
QNIAHTKAETGVAGATKANLQEQNANLRAQNDLIKAQTIKAIADATGWTTEETAFKLF
GIGISTSKRYPSNNPPKPKFNKYDVGTTYFHDYLNQYRDRNGNLTA"
CDS 2552..2872
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="QIR82371.1"
/translation="MSSKGNTPKIIYPFGPKISGSNEFLLEWDITDQRAPVQDPGELY
ERYLRPEIQDELDNEKLDDFDDDISQYDYDDISELGADIAMMNLPEYAEVAKRLAKRS
KARS"
CDS 3084..3845
/note="similar to PHA00330"
/codon_start=1
/transl_table=11
/product="replication initiator protein"
/protein_id="QIR82373.1"
/translation="MFCEKPKGRFPCGKCRACRLRKANEKMILSIFAAHEYKKKGQFL
TLTFNDSHVPPELDHSIFSAFMKRLRRRDGTPDVKFHVAGEYGEINGRPHFHVLFYNH
KYDINDINRSWSDPYTGDSFGFTYDGTLTPKSMKYVSGYVNKRGYDPGSGKRPPYGRT
SVLLPDGLTPDEILSMCKTGKIQYNGRKFSVPQNWRRRYNQIWKRFEEDRSWYNFEHR
PKNELTPDQVRAIMDMRDAYMAAKRGKRKKAGRMC"
ORIGIN
1 atggcaatca aaagatatgc tcataattta tcgcataatg ttacaggtac tgttaatatg
61 ggattaaatt atcctgttga catcatggaa gtattccctg gcgatagttt ccgtattact
121 gctaaaaatt tgtcgcgttt tatgccgcaa atcgcaccga caacatctga tgtgtttgcc
181 gggtttgatt tttatgatgt cccgctgcga caattgtgtg aattagttgg tattaactgg
241 gataagtatt tgaccggtgg tcagaatggt actgatatga ttcaggcacc gactattact
301 ataccggaat caggttatga acctggctcg ttggctgact ggttaggatt tccaacaaat
361 tatatggacc cttctacgaa tcaaaaagtt gttgttggtg caggtttagt atttgatgca
421 tggccggtta ttgcgtacat gcatattatt gattccaatt atttggacca aaattttata
481 caacatttgg attttacaaa atatcaggag ttcttagatg gcacatatca attcaaagat
541 gcccaaggca acctaattga ctatgacatt cttgtcgacg gaatctttcc caaagcttgg
601 tcccgggact attttggacg cgctatgtcg aatacccaac gcggaccagt tgtaaatgtt
661 cctgttggtg aaactgctga tttgcagcct aatgttgcac ctattgttac aggaggttat
721 tatacgcctt cagttactac tactttgact ttaaagggta aaactactgc tatacctggt
781 gtttctgtta ctggttctga tttttcttat agttttgttg ctggtaatat tgttggttct
841 actgttgttt tgaataagga tgtttcttat ggtgttaatg attcagttcg tattgtattt
901 actggtgata atacttataa gttccaggag cttttaacta atggccaatg gcaagatgtg
961 cctgatattt ctgctttgtg ggatgtatct ttgtcacctg ttggtaatat taatggtact
1021 ttaggtactg gtaatattgc tgatttgtct aaagtttctg ctaatttgtt aaatgcaacc
1081 ggtatttcgt tgatagcgtt ccgtacagcg gcacgtatgc agcgttttgg tgaaatcttg
1141 cagcaggccg gtgctcgtgc tgttgaatat acaatggcgt tttttggcgt tcgtgttccg
1201 gacggccgtg cacagcgtcc tatattccat ggctcgttta atatgcctgt tgtattcagt
1261 gaggtattgc agacttcgca gactacggat acagcaccat tggcgtatat ggcaggtcat
1321 ggtattactg gtggtgtaaa tcgtcctata cacattaagt gtatcgaaca cggctatatt
1381 gttgttatcg gacattttat gccgcgcagt cagtatcagc agtatatacc gaagtactta
1441 ctgcggttta atcgtatgga cataccaaat ccgttgttcc aacacattgg tgaacaggca
1501 gtattgcgca aggaaatcta tccgaattct gctaatccgg acgatacatt cggttatgta
1561 ccgcggtata cagaattgac gacaataccg tcagttttgc gtggccacat gaaagacacg
1621 tttttgcatt ggtccatggc tcgtgtatat aacagtgagc cggtattatc cgcagcatgg
1681 cgttatgaaa agccgtctaa tcggtcgttt agtgtgccgg atgaggacca gattgtaatg
1741 tctgttggct ttgatattca agcgcgtcgt gtgtttaagc gtaatccaaa tcctggtatt
1801 cacattgttt aatggaggtg tactatggac ccgattttag gtgcagctgc tcttactggt
1861 gtgagtaatc ttgcaagtaa tctgtttaat attggctctg taaatagagc caataagcag
1921 aatttgcaaa tcgcacgcga acaaatggcg tttcaagaac gcatgagtaa taccgcggtt
1981 caacgatatg ccaaagattt ggaggcagcc ggttttaatc ggctgcttgc cgctggtggc
2041 aatagtgcta gtacgccttc tggtgctagt gcgtcaatgt ctcctgcaaa gttaacacca
2101 attgatatta tggcgttaga gcaggcacgg cagaatatag cacacactaa ggcagagact
2161 ggtgttgctg gtgctactaa ggctaatctg caagaacaga atgctaattt gcgtgcgcag
2221 aatgatttga taaaagcgca gactattaaa gcgattgctg atgctaccgg ttggacaact
2281 gaggagaccg cttttaagtt gtttggtatt ggtatatcaa cgtctaagcg ttatccgtct
2341 aataatccgc caaaacctaa atttaataag tatgatgttg gtacaacata ttttcacgat
2401 tatctgaatc agtatcgcga taggaacgga aatttaactg cataaaataa tcgctaatgt
2461 tattgcgatg cttagatata tataaattgc ggttaataat ccgtcaatta atttgttttt
2521 catacccaaa ttataacaaa ggaggaaaga aatgtcaagt aaaggaaaca cccctaaaat
2581 aatataccca tttggcccga aaatttcggg ctctaacgag tttttgctag aatgggatat
2641 aacggaccag cgagcaccag ttcaagaccc tggcgagctt tacgaaagat atctgcggcc
2701 cgagattcaa gatgagttag ataatgaaaa attggatgat ttcgatgacg acatttcaca
2761 atacgattat gatgacatat ccgagctcgg cgcagatatc gcgatgatga atttgccgga
2821 atatgccgaa gtggctaagc gattggcgaa gcgaagcaaa gccaggagct agccacgcag
2881 gcatgtcgcc ggcaatgtcg cgcgtcctgc ggatgagcgc ggcggcccct acagccatgg
2941 ccgcgcggta gagcaggtaa gcaaggcttt gccaggcgac ccgttgcacg ttacatatac
3001 ttgatatata acgtgcaact gacacacttc aagccaggca agggccgcag atatttttcg
3061 taaggcgagc aaggaggtct ttaatgtttt gcgaaaagcc taaaggaagg ttcccgtgtg
3121 ggaaatgtcg cgcatgtcgt ttgcgtaagg caaacgaaaa aatgatatta tctatattcg
3181 ccgcgcatga atataagaaa aaaggtcaat tcttgacttt gacttttaac gattcccatg
3241 ttccgccgga gcttgaccat tcgatttttt ccgcgtttat gaagcggttg cgtcggcgtg
3301 atggtacgcc tgatgtaaag tttcatgttg ctggtgagta cggtgagata aacggtcggc
3361 cacattttca tgttcttttt tacaatcata agtatgatat taacgatatt aatcgttcat
3421 ggtctgaccc atatactggt gattctttcg gatttactta tgacggtact ttaacgccga
3481 aatcaatgaa atatgtatct ggttatgtca ataaacgcgg atatgaccct ggttcaggta
3541 aacgcccgcc gtacggtcgt acatctgttt tattgcctga tggcttgaca ccagatgaaa
3601 ttttgtcaat gtgtaagaca ggtaagatac agtataacgg tcgcaagttc agcgttccgc
3661 agaattggcg gcggcggtac aatcagatat ggaaacggtt tgaggaggac cgttcctggt
3721 ataattttga acatcgtcca aaaaatgaat tgacacctga ccaggttcgt gctattatgg
3781 atatgcgaga tgcatatatg gctgcaaaac gcggtaagcg taaaaaagct ggccgtatgt
3841 gttaattatt tataaataaa ggagtaaaat tatggcatat cgttttggtc gtcgtcgtgg
3901 tgtttatgga cgcaaacccc gttcttataa agcattttac gcgcgcaagc gtcgccgcgt
3961 atcttatggt acaccgttta ataaacgtgg aggaatttta agatgaacaa agtattgaag
4021 gccatattgg ttatattaaa gaatgcaaca attataatac ctttgattga aggtgttgtt
4081 tgttcaattc agaagttggt taacccaaat ttggaggaaa gaaatgaaac atcacgcagt
4141 gcatcatctg cacgttaaat atcgtggtca gacatatacg atatgtcata cgactgactg
4201 tacgtctatg aattatttaa tgaattgtat ccgcgaaata aaggaggctg caa
//
