LOCUS AF524867 7453 bp RNA linear VRL 28-FEB-2003
DEFINITION Human echovirus 9 isolate DM, complete genome.
ACCESSION AF524867
VERSION AF524867.1
KEYWORDS .
SOURCE Echovirus E9 (E9)
ORGANISM Echovirus E9
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
Picornavirales; Picornaviridae; Ensavirinae; Enterovirus;
Enterovirus B.
REFERENCE 1 (bases 1 to 7453)
AUTHORS Paananen,A., Ylipaasto,P., Rieder,E., Hovi,T., Galama,J. and
Roivainen,M.
TITLE Molecular and biological analysis of echovirus 9 strain isolated
from a diabetic child
JOURNAL J. Med. Virol. 69 (4), 529-537 (2003)
PUBMED 12601761
REFERENCE 2 (bases 1 to 7453)
AUTHORS Paananen,A., Ylipaasto,P., Rieder,E., Hovi,T., Galama,J. and
Roivainen,M.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) Enterovirus Laboratory, National Public
Health Institute (KTL), Mannerheimintie 166, Helsinki 00300,
Finland
FEATURES Location/Qualifiers
source 1..7453
/organism="Echovirus E9"
/mol_type="genomic RNA"
/isolate="DM"
/db_xref="taxon:12060"
/note="infectious clone"
CDS 743..7354
/codon_start=1
/product="polyprotein"
/protein_id="AAO48740.1"
/translation="MGAQVSTQKTGAHEASLSASGGSIIHYTNINYYKDAASNSANRQ
DFTQDPSKFTEPVKDVMIKSLPALNSPSAEECGYSDRVRSITIGNSTITTQECANVVV
AYGRWPAYLRDDEATAEDQPTQPDVATCRFYTLESVQWQENSAGWWWKFPDALSNMGL
FGQNMLYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAEMGCSKVDGVVNAQGLSNS
ETPIEFDRTSTTPEVGVVQKAVYNAGMGVGVGNLTIFPHQWINLRTNNSATIVIPYIN
CVPMDNMFRHNNFTLMVIPFAPLKSSGGTNYVPITITVAPMDAEYNGLRLAGHQGLPT
MNTPGSTQFLTSDDFQSPCAMPEFDVTPCMDIPGEVHNLMEIAEVDSVVPVNNTSTHM
EGTDAFQIKVTAGNVQDKNAIFSFQLNPGNSTVLRRTLLGEILNYYAHWSGSIKLTFL
FCGSAMATGKLLLAYSPPGASVPKSRRDAMLGTHVIWDVGLQSSCVLCVPWISQTHYR
LVAQDEYTSAGYITCWYQTNIVVPPETPSDCVVLCFVSACNDFSVRMLKDTPFIEQAA
ELQNDVRQAVEGAIGRVADTIRSGPSNSEAIPALTAAETGHTSQVVPSDTMQTRHVKN
YHSRSESTIENFLCRAACVRMAKYETKGNPESTDRFDAWEISIRDMVQLRRKCEMFTY
LRFDVEVTFVITSYQHQGTINQDMPPMTHQIMYIPPGGPIPKKVDGYEWQTSTNPSIF
WTEGNAPPRMSIPFISIGNAYSSFYDGWSHFDSKGAYGFNTLNKMGHIYCRHVNKETP
AEVTSYIRIYFKPKHVRAWVPRPPRLCQYKNKANVNFDATAVTETRETINTVPVSNHG
SNRRGDLAALNTHGVFGQQSGAVYVGNYRLVNRHLATHTDWQNCVWEDYNRDLLVSTT
TAHGCDTIARCQCTTGVYFCASRNKHYPVSFEGPGLVEVQESEYYPKRYQSHVLLAAG
FSEPGDCGGILRCEHGVIGLVTMGGEGVVGFADVRDLLWLEDDAMEQGVKDYVEQLGN
AFGSGFTNQICEQISLLKESLVGQDSILEKSLKALVKIISALVIVVRNHDDLITVTAT
LALIGCTSSPWRWLKQKVSQYYGIPMAERQNNGWLKKFTEMTNACKGMEWIAIKIQKF
IDWLKVKILPEVKEKHEFLTRLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHY
CRKYAPLYAAEAKRVFSLEKKMSNYIQFKSKCRIEPVCLLLHGSPGAGKSVATNLIGR
ALAEKLNSSVYSLPPDPDHFDGYKQQSVVIMDDLCQNPDGKDVSLFCQMVSSVDFVPP
MAALEEKGILFTSPFVLASTNAGSINAPTVSDSRALARRFHFDMNIEVISMYSQNGKI
NMPMSVKTCDEECCPANFKKCCPLVCGKAIQFIDRRTQVRYSLDMLVTEMFREYNHRH
SVGATLEALFQGPPVYREIKISVAPETPPPPAIADLLKSVDNEVVREYCKEKGWLVPE
INSTLQIEKHVSRAFICLQALTTFVSVAGIIYIIYKLFAGFQGAYTGMPNQKPKVPTL
RQAKVQGPAFEFAVAMMKRNSSTVKTEYGEFTMLGIYDRWAVLPRHAKPGPTILMNDQ
EVGVLDAKELVDKDGTNLELTLLKLNRNEKFRDIRGFLAKEEVEVNEAVLAINTSKFP
NMYIPVGQVTDYGFLNLGGTPTKRMLMYNFPTRAGQCGGVLMSTGKVLGIHVGGNGHQ
GFSAALLKHYFNDEQGEIEFIESSKEAGFPVINTPSRTKLEPSVFHQVFEGNKEPAVL
RNGDPRLKANFEEAIFSKYIGNVNTHVDEYMMEAVDHYAGQLATLDISTEPMKLEDAV
YGTEGLEALDLTTSAGYPYVALGIKKRDILSKKTKDLTKLKECMDKYGLNLPMVTYVK
DELRSAEKVAKGKSRLIEASSLNDSVAMRQTFGNLYKTFHLNPGIVTGSAVGCDPDLF
WSKIPVMLDGHLIAFDYSGYDASLSPVWFACLKLLLEKLGYSHKDTNYIDYLCNSHHL
YRDKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLMLKVYKGIDLDQFRMIAYGDDVIA
SYPWPIDASLLAEAGKGYGLIMTPADKGECFNEVTWANVTFLKRYFRADEQYPFLVHP
VMPMKDIHESIRWTKDPKNTQDHVRSLCQLAWHNGEHEYEEFVRKIRSIPVGRCLTLP
AFSTLRRKWLDSF"
ORIGIN
1 ttaaaacagc ctgtgggttg ttcccaccca cagggcccat ggggcgcaag cacactggta
61 ttgcggtacc tttgtgcgcc tgttttatcc acccttcccc aatgaaactt agaagcttga
121 ctcaaacggt caatagacag cccagtgcac caactgggtc tcgaccaggc actcctgttt
181 ccccggactg agtatcaata ggctgcttgc gcggctgaag gagaaaacgt tcgttacccg
241 gccaattact tcgagaaacc tagtaccacc atggacgttg cgcagtgttt cgctccacac
301 aaccccggtg tagatcaggt cgatgagtca ccgcaatccc cacgggcgac cgtggcggtg
361 gctgcgctgg cggcctgccc atggggcaac ccatgggacg cttcaatact gacatggtgc
421 gaagagtcta ttgagctaat tggtagtcct ccggcccctg aatgcggcta atcctaactg
481 cggagcagat acccacatac cagtgggcag tctgtcgtaa cgggcaactc tgcagcggaa
541 ccgactactt tgggtgtccg tgtttccttt tattcttata ttggctgctt atggtgacaa
601 ttgaaaggtt gttaccatat agcttttgga ttggccatcc agtgagcaac agagcgatca
661 tactcctttt tgttgggttt gtaccacttg attatagtag ttacaacacc ttgctatacg
721 tcattcattt aaacacgaga aaatgggagc acaagtgtca acacagaaaa ctggcgcgca
781 cgaggccagc ctaagcgcta gtggaggctc tatcatccac tatacaaaca tcaactacta
841 caaggatgca gcgtccaact ctgctaacag acaggacttc acccaagacc cgagcaaatt
901 tactgaacca gttaaagacg tgatgattaa gtctttgcct gcgcttaact caccctctgc
961 agaggagtgt ggatatagtg acagggtgag gtcaatcacc atagggaact ctaccataac
1021 cacgcaagaa tgtgccaacg tcgtggtggc ttatggaagg tggcccgcct atttgagaga
1081 tgatgaagcg actgcagagg accagccgac acaaccagac gtagcaacgt gtagattcta
1141 caccctagag tcggtgcagt ggcaagaaaa ctcagctggg tggtggtgga aatttcctga
1201 tgcacttagc aacatgggcc tctttggtca gaacatgtta taccactatt taggaagaac
1261 gggttacaca atacacgtac aatgcaatgc gtccaagttc caccagggat gcttgctggt
1321 tgtgtgtgta cctgaagctg aaatggggtg ttcaaaggtt gatggggttg tcaatgccca
1381 aggattgtcc aatagcgaaa ctcctattga atttgacaga acaagcacaa cgccagaagt
1441 tggagtggta caaaaggcag tgtacaacgc aggtatggga gttggtgttg ggaatttaac
1501 catctttcca caccagtgga tcaacctacg caccaacaac agtgccacca tagtgatacc
1561 ttacataaac tgtgtgccca tggacaatat gtttaggcac aacaacttca cccttatggt
1621 tatcccgttc gcacctttaa aaagcagtgg tggaaccaac tatgtcccaa ttacaatcac
1681 agtcgcaccc atggatgccg agtacaatgg gctgcggcta gcggggcatc aaggattgcc
1741 aaccatgaac actccaggaa gtacgcaatt tctcacgtct gatgattttc aatcaccttg
1801 cgccatgcct gaatttgacg tgacaccgtg tatggacatc cctggtgaag tacacaatct
1861 gatggagatc gctgaggtgg attcggttgt tcctgtcaac aacacctcta cgcacatgga
1921 aggaaccgat gcatttcaga tcaaggtcac tgctggcaat gtgcaggata aaaacgcaat
1981 attttctttc cagctaaacc caggcaatag caccgtgttg cgccgcacgc tgttgggtga
2041 aatactgaac tattatgcac actggtcggg tagtatcaag ttgaccttcc ttttctgtgg
2101 atcagccatg gccactggta agcttttgct tgcatattca ccacctggag catctgttcc
2161 gaaatcccgc agagatgcca tgttagggac tcatgtgatt tgggatgtgg gcctgcaatc
2221 aagctgcgtg ttgtgtgtac cgtggattag ccaaacgcac tacaggcttg tggcacaaga
2281 tgagtacacg tctgcaggtt acatcacatg ctggtaccag accaacatag tagtcccacc
2341 agaaacaccg tctgactgtg tagtgttgtg ttttgtatct gcatgtaacg acttctcagt
2401 gcggatgctc aaggatactc cattcataga acaagctgcg gagctgcaga atgacgtgcg
2461 gcaagcagtg gagggagcaa taggcagggt tgctgacaca atacgcagtg ggccttccaa
2521 ttctgaggca attcccgcgc tcacagccgc tgaaactgga cacacctcac aagtagtacc
2581 cagtgacact atgcaaacta ggcacgtgaa aaattatcac tcccggtccg aatccaccat
2641 agaaaacttc ctgtgtaggg cggcttgtgt gcgtatggct aaatatgaga caaagggcaa
2701 ccccgagagc actgatcgct ttgatgcgtg ggagataagc atacgcgaca tggtccaatt
2761 gcgccgtaag tgtgagatgt ttacatactt gcgctttgac gtggaagtca catttgtaat
2821 aactagttac caacatcaag ggaccattaa ccaagacatg cccccgatga ctcaccaaat
2881 aatgtacata ccacccggcg gccccatccc taagaaggtg gatggctatg agtggcagac
2941 atcaactaac cccagcatat tttggaccga agggaatgcc ccgcctagga tgtccatccc
3001 atttattagc attggcaatg cttacagcag cttttatgac gggtggtctc attttgacag
3061 caaaggtgcc tatggattta acactctaaa caagatgggg cacatttact gtaggcacgt
3121 gaacaaggaa acccccgctg aggtcaccag ttacatcagg atttacttca aacccaaaca
3181 tgtcagggcg tgggtaccaa gaccaccgcg gttgtgtcag tacaaaaata aagcgaatgt
3241 gaactttgac gcaactgcag tcaccgaaac acgggaaact ataaacactg tccctgtgtc
3301 gaaccatggc agcaatcgcc gtggtgactt ggctgcactg aacacacatg gcgtgtttgg
3361 ccaacagtct ggggctgtgt atgtagggaa ttacagattg gtgaataggc atcttgcaac
3421 acacactgat tggcagaact gtgtgtggga agattacaac agagacctcc tcgtgagcac
3481 caccaccgcg catggctgtg atactatcgc cagatgtcaa tgcacaaccg gcgtgtactt
3541 ctgtgcatcg aggaacaagc attacccagt cagctttgag ggcccaggcc tggttgaagt
3601 acaagaaagt gaatattacc ctaaaagata ccaatcccat gtgctgctcg cagcagggtt
3661 ttcagaacca ggagactgtg gtggaattct taggtgtgag cacggtgtga ttggactggt
3721 cactatgggg ggtgagggag tcgttgggtt cgctgacgtt cgcgacctgc tatggctgga
3781 ggatgatgca atggagcagg gagtgaagga ttacgtcgaa cagcttggta atgctttcgg
3841 ttctggattc actaaccaaa tttgtgaaca gatcagcctc ttgaaagagt cgttggtggg
3901 gcaggactca atcttggaaa aatccctcaa agccctagtc aaaatcattt cagcactggt
3961 gatagtggta aggaaccacg atgacctaat aacggtgact gccacccttg cactcattgg
4021 atgcacctca tcaccgtggc gatggctcaa acagaaagtg tcacaatact acggcatacc
4081 catggctgag cgtcaaaaca acgggtggct caagaagttt actgagatga ccaatgcctg
4141 caaagggatg gaatggattg ctataaaaat ccaaaaattc atagattggc ttaaggttaa
4201 gattctgcca gaagtaaagg agaagcacga atttctaact agactcaaac agctccccct
4261 tctggaaagt caaattgcca ctatcgaaca aagtgcgccg tctcagagcg accaggaaca
4321 gctcttctcg aatgtccagt actttgccca ctattgcaga aaatacgcac ctctatatgc
4381 tgccgaggca aaaagggtgt tctccctcga aaagaaaatg agcaactaca tacagttcaa
4441 gtccaaatgc cgtattgaac ctgtatgctt gcttttgcac ggaagccctg gagccggaaa
4501 atcggtcgcc accaacctaa ttgggcgggc attagctgag aaactcaaca gttcagtata
4561 ctccttgccg cctgatccag accactttga tggttacaaa caacaatccg tcgtgatcat
4621 ggacgacctt tgccaaaatc cagatggtaa ggacgtgtcc ttgttctgcc aaatggtatc
4681 cagcgtagat tttgtaccac caatggccgc gctagaagag aaaggaattc tgttcacttc
4741 ccccttcgtc ctagcatcta caaatgctgg ctccatcaat gcgccaacag tctcggacag
4801 ccgggcttta gccaggaggt tccattttga catgaatata gaggtcatct cgatgtatag
4861 tcagaatggc aagattaaca tgcccatgtc agtgaaaaca tgtgatgagg agtgttgtcc
4921 agctaatttc aaaaagtgct gccctctcgt gtgcggaaaa gccatccagt tcattgacag
4981 aaggactcaa gtgaggtact ctttggacat gttggttacc gagatgttca gggaatacaa
5041 ccacagacac agtgttggag caaccctcga ggcgctattc caaggcccgc cagtatacag
5101 ggaaatcaaa attagtgtcg cacctgaaac cccaccgcca ccagcaatcg cggacttgct
5161 gaaatcagta gacaatgagg tagtcaggga gtattgtaaa gagaaggggt ggcttgttcc
5221 tgagatcaac tccactcttc agatcgagaa acatgtcagc cgagccttta tctgtcttca
5281 ggcactaacc accttcgttt ctgtggctgg aattatttac atcatttaca aactatttgc
5341 agggtttcaa ggcgcctaca cagggatgcc caaccaaaag ccaaaagtgc ccacactaag
5401 gcaagctaaa gtgcaaggcc ctgcttttga atttgctgtg gctatgatga agagaaactc
5461 cagcacagtg aagacagagt atggcgagtt tacaatgttg ggtatctacg acaggtgggc
5521 cgtgttacca cgccacgcta aacccgggcc aaccatcctc atgaatgacc aggaagttgg
5581 cgtgctggat gcaaaagaac tggtggataa agatggtaca aaccttgaac taacgctgct
5641 gaaacttaat cggaatgaga aattcaggga catcagaggc ttcctggcca aagaagaggt
5701 ggaggttaat gaggctgtcc tggcaataaa caccagcaag ttcccgaaca tgtacattcc
5761 agtagggcaa gtaacagact atggtttcct gaacctgggt ggcaccccca cgaagagaat
5821 gcttatgtac aacttcccta ccagagctgg ccaatgcggt ggtgttctca tgtccactgg
5881 taaagtgttg ggaatacacg ttggtggaaa cggtcaccaa ggcttctcag cagctctcct
5941 taaacattat ttcaatgatg aacaaggcga gattgaattc attgaaagct caaaggaggc
6001 ggggtttcca gtcatcaaca caccgagcag aacaaaattg gaaccaagcg tgttccacca
6061 ggtgtttgag ggcaacaagg aaccggcagt cctcagaaat ggagacccgc gacttaaagc
6121 caattttgag gaagcaatct tctccaagta tattggcaat gtgaacacac atgtagatga
6181 gtacatgatg gaggccgtcg accattatgc aggacaacta gccactctgg acattagcac
6241 ggagcccatg aagctagagg atgcagtgta cggcacagaa gggttggaag cgcttgacct
6301 gaccaccagt gcaggatacc catacgtcgc gttaggcatc aagaagagag acatcttgtc
6361 taagaagacc aaggacttga ccaaattgaa ggagtgcatg gacaaatacg gtttgaatct
6421 gccaatggtg acctacgtga aggatgagct cagatcagca gaaaaagtgg ctaaagggaa
6481 gtctaggctt attgaagcat ccagcttgaa tgattctgtt gcaatgaggc aaactttcgg
6541 caacctatac aagacatttc atctaaaccc ggggattgtg acaggcagtg cagtcggttg
6601 tgaccccgat ctgttctgga gcaaaatacc tgtaatgcta gatggacatc ttatagcctt
6661 tgactactcc ggatatgacg ctagcctgag ccccgtgtgg tttgcttgtt taaagctgct
6721 acttgaaaaa cttggctatt cacacaagga cacaaattac atcgattacc tgtgcaactc
6781 ccaccacctg tacagggata aacactactt tgtgcgcggt ggcatgccct caggatgttc
6841 tggtaccagt atcttcaact caatgattaa caacatcata atcaggacat taatgttgaa
6901 ggtatacaaa ggcattgacc tggatcaatt caggatgatt gcatacggtg atgatgtgat
6961 agcatcttac ccctggccga ttgacgcctc tctgttagcc gaagctggca agggatatgg
7021 gctgattatg acgcctgcgg ataaagggga atgtttcaac gaagtcacct gggctaatgt
7081 caccttttta aagaggtact tcagagcaga tgagcaatac cctttcctgg tgcacccggt
7141 catgcccatg aaggacatcc atgaatctat caggtggacg aaagatccaa agaacaccca
7201 agatcatgtg cgatccttgt gccaattggc ttggcacaat ggagagcacg aatacgaaga
7261 gtttgtccga aagattagaa gcatcccagt tgggcgctgt ctgactttac ctgcgttttc
7321 gactttgcgc aggaaatggt tggactcttt ttaagttaga gacaatttgg tacaacttaa
7381 attggcttaa ccctaccgca cttaccgaac tagacaatgg tgcgataggg gtaaattctc
7441 cgcattcggt gcg
//
