LOCUS AY843301 7394 bp RNA linear VRL 16-AUG-2007
DEFINITION Human enterovirus 83 strain USA/CA76-10392, complete genome.
ACCESSION AY843301
VERSION AY843301.1
KEYWORDS .
SOURCE Enterovirus B83
ORGANISM Enterovirus B83
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
Picornavirales; Picornaviridae; Ensavirinae; Enterovirus;
Enterovirus B.
REFERENCE 1 (bases 1 to 7394)
AUTHORS Oberste,M.S., Maher,K., Nix,W.A., Michele,S.M., Uddin,M.,
Schnurr,D., al-Busaidy,S., Akoua-Koffi,C. and Pallansch,M.A.
TITLE Molecular identification of 13 new enterovirus types, EV79-88,
EV97, and EV100-101, members of the species Human Enterovirus B
JOURNAL Virus Res. 128 (1-2), 34-42 (2007)
PUBMED 17485128
REFERENCE 2 (bases 1 to 7394)
AUTHORS Oberste,M.S., Maher,K., Nix,W.A., Michele,S.M., Schnurr,D.,
al-Busaidy,S., Neill,S., Maurice,C. and Pallansch,M.A.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2004) Respiratory and Enteric Virus Branch,
Centers for Disease Control and Prevention, 1600 Clifton Rd NE,
Mailstop G-17, Atlanta, GA 30333, USA
FEATURES Location/Qualifiers
source 1..7394
/organism="Enterovirus B83"
/mol_type="genomic RNA"
/strain="USA/CA76-10392"
/db_xref="taxon:318566"
5'UTR 1..742
CDS 743..7294
/codon_start=1
/product="polyprotein"
/protein_id="AAX47037.1"
/translation="MGAQVSTQKTGAHETGITATNNSVIHYTNINFYKDAASNSANRQ
DFSQDPSKFTEPMKDLMVKTLPALNSPTVEECGYSDRVRAITLGNSTITTQECANVVV
GYGIWPSYLADNEATAEDQPTQPDVATCRFYTLDSVDWEKTSAGWWWKFPDALKDMGL
FGQNMLYHYLGRTGYTIHVQCNASKFHQGCLLVVCVPEAQMGSAVPNQAFLNDVLSKG
ENASMFTPDVSTQGIQTYVCNAGMGVAVGNLTIFPHQWINLRTNNSATIVMPYINSVP
MDNLYRHYNFTLMVIPFANLDYAAGSSTKVPITITVAPMCAEYNGLRLAGHQGLPVMN
VPGSNQFLTSDDYQSPSAMPQFDVTPEMRIPGEVRNLMEIAEVDSVVPVYNVPRYVNS
MDTYAIPVQTGKTKKQAFGFKLQPGADSVFKHTLLGEILNYYANWSGSIKLTFMFCGS
AMATGKFLLAYSPPGAGVPGSRKEAMLGTHVVWDIGLQSSCVLCVPWISQTHYRYVEH
DVYTDAGYITCWYQTSIVVPVDVATTSKILCFVSACNDFSVRLLRDTPFLTQTALYQS
DPNDRETVTDTAPSGQTNSTRIPALTAAETGHTSQVVPSDTMQTRHVNNFHTRSESSI
ENFLCRAACATIVTYNTNVSDNFTSWRINTREVAQLRRKLEMFTYMRFDLELTFVITS
TQADGTNQAADNSVLTHQIMYVPPGGPIPNKVDDYCWQTSTNPSVFWSEGCAPPRMSI
PFISIGNAYSMFYDGWSHFSQTGLYGYTSLNNMGQLFFRHVNKATVHNYSSVARIYFK
PKHIKAWVPRPPRLCDYMYKANVDFKTQAVTDQRGDHRISKDDHLPEMQNTGAFGQQS
GAIYVANYRVVNRHLATHTDWQNCVWEDYNRDLLVSTTTAHGCDTIARCQCTTGVYFC
ASRNKHYPVSFEGPGLVEVQESEYYPKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGL
VTMGGEGVVGFADVRDLLWLEDDAMEQGVKDYVEQLGNAFGSGFTNQICEQVNILKET
LVGQDSILEKSLKALVKIISALVIVVRNHDDLITVTATLALIGCTSSPWRWLKQKVSQ
YYGIPMAERQNNGWLKKFTEMTNACKGMEWIAIKIQKFIEWLKVKVLPEVREKHEFLN
RLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYASEAKRVFSLEK
KMSNYIQFKSKCRIEPVCLLLHGSPGAGKSVATNLIGRSLAEKLNSSVYSLPPDPDHF
DGYKQQAVVIMDDLCQNPDGKDVSLFCQMVSSVDFVPPMAALEEKGILFTSPFVLAST
NAGSINAPTVSDSRALARRFHFDMNIEVISMYSQNGKINMPMSVKTCDEECCPVNFKK
CCPLVCGKAIQFIDRKTQVRHSLDMLVTEMFREYNHRHSVGATLEALFQGPPIYREIR
ISVAPETPPPPAIADLLKSVDSEAVREYCKEKGWLVPETNSTLQIEKHVSRAFICLQA
LTTFVSVAGIIYIIYKLFAGFQGAYTGMPNQKPKVPTLRQAKVQGPAFEFAVAMMKRN
SSTVKTEYGEFTMLGIYDRWAVLPRHAKPGPTILMNDQEVGVLDAKELVDKDGTNLEL
TLLKLNRNEKFRDIRGFLAKEEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFLNLGGI
PTKRMLMYNFPTRAGQCGGVLMSTGKVLGIHVGGNGHQGFSAALLKHYFNDEQGEIEF
IENSKDAGFPVINTPSKTKLEPSIFHQVFEGNKEPAVLRNGDPRLKANFEEAIFSKYI
GNVNTHVDEYMLEAVDHYAGQLATLDISTEPMKLEDAVYGTEGLEALDLTTSAGYPYV
ALGIKKRDILSKKTRDLTKLKECMDKYGLNLPMVTYVKDELRSVEKVAKGKSRLIEAS
SLNDSVAMRQTFGNLYKTFHLNPGIVTGSAVGCDPDLFWSKIPVMLDGHLIAFDYSGY
DASLSPVWFACLKMLLEKLGYTHKETNYIDYLCNSHHLYRDKHYFVRGGMPSGCSGTS
IFNSMINNIIIRTLMLKVYKGIDLDQFRMIAYGDDVIASYPWPIDASLLAEAGRDYGL
IMTPADKGEHFNEVTWTNVTFLKRYFRADEQYPFLVHPVMPMKDIHESIRWTKDPKNT
QDHVRSLCLLAWHNGEHEYEEFIRKIRSVPVGRCLTLPAFSTLRRKWLDSF"
mat_peptide 743..949
/product="1A (VP4)"
mat_peptide 950..1726
/product="1B (VP2)"
mat_peptide 1727..2437
/product="1C (VP3)"
mat_peptide 2438..3289
/product="1D (VP1)"
mat_peptide 3290..3739
/product="2A"
mat_peptide 3740..4036
/product="2B"
mat_peptide 4037..5023
/product="2C"
mat_peptide 5024..5290
/product="3A"
mat_peptide 5291..5356
/product="3B (VPg)"
mat_peptide 5357..5905
/product="3C"
mat_peptide 5906..7291
/product="3D"
3'UTR 7295..7394
ORIGIN
1 tttaaaacag cctgtgggtt gttcccaccc acagggccca ctgggcgcta gcactctggt
61 atcacggtac ccttgtgcgc ctgttttata tccccacccc agtggaacat tagaagcagc
121 acacctatga tcaatagtgg gcgtggcatc cagtcacgtt atgatcaagc acttctgtga
181 ccccggactg agtatcaata gactgctcac gcggttgaag gagaaaacgt tcgttacccg
241 gccagttact tcgagaaacc cagtaacacc atgaatgttg cagagtgttt cgctcagcac
301 ttcccccgtg tagatcaggt cgatgagcca ctgcattccc cacgggcgac cgtggcagtg
361 gctgcgttgg cggcctgcct atggggtcac ccataggacg ctctaatact gacatggtgc
421 gaagagtcta ttgagctaac tggtagtcct ccggcccctg aatgcggcta atcctaactg
481 tggagcacat tcccccaatc cagggggcag tgtgtcgtaa cgggcaactc tgcagcggaa
541 ccgactactt tgggtgtccg tgtttctttt tattctcata ttggctgctt atggtgacaa
601 ttacagaatt gttaccatat agctattgga ttggccatcc ggtgactaac agagcaatta
661 tttatcaatt cgttggattt gtcccactcg atttcaaagc agtcaataca ctctcatata
721 tcgttacact caacacaaca aaatgggggc acaagtgtcc acgcagaaaa ctggagcaca
781 tgaaactggc atcacagcaa ccaacaactc tgtcatccat tatacgaata taaactttta
841 caaagatgct gcctcaaact cagccaatag gcaggatttc tcgcaagatc ctagcaagtt
901 cactgaaccg atgaaagacc taatggttaa aaccctaccc gctctcaatt cgccaacagt
961 ggaggagtgt gggtacagcg acagggtgcg agcgatcact ctgggcaact caacaattac
1021 cactcaggag tgtgccaacg tggttgtggg atacggtatc tggccctcat atctggcaga
1081 taatgaggcc actgccgaag atcaaccaac acaaccagac gtggctactt gccgctttta
1141 taccctggac tcagtggact gggaaaagac atcggctggg tggtggtgga agtttccgga
1201 cgcactaaag gatatgggtc tgtttggaca gaacatgctt taccactacc tggggcgtac
1261 cggttacact atacacgtac aatgcaatgc atcaaaattc catcaaggct gcttgcttgt
1321 cgtgtgcgta cccgaggcac agatggggtc ggcagttcca aaccaggcat ttttgaatga
1381 tgtcttaagc aaaggggaaa acgcatccat gttcacacct gacgtaagca cgcaaggcat
1441 tcaaacttat gtgtgcaacg caggaatggg tgtggctgtt ggcaacctca ccatatttcc
1501 ccatcaatgg atcaacttac ggacaaacaa cagcgcgacc atagtgatgc catacattaa
1561 cagtgtaccc atggacaatc tataccgtca ttacaacttc acactaatgg tgatcccatt
1621 tgccaactta gactatgcag ccggctcatc aaccaaggtc cccatcacca taacagttgc
1681 cccgatgtgt gcagaataca acgggctgcg cctggcgggc catcaggggt tgcctgtgat
1741 gaatgtgcca ggtagtaacc aatttttgac atcggatgac taccaatccc catctgctat
1801 gcctcagttt gacgtgactc ctgagatgag gataccaggg gaggtccgta acttgatgga
1861 gattgccgag gtggactcag tggttccggt gtataatgtg ccacgttatg taaactccat
1921 ggacacctat gccatcccgg tccaaacagg aaagacaaag aaacaggcat ttggtttcaa
1981 gttacaacca ggagctgact cagtattcaa gcacacctta ctgggtgaga tactaaatta
2041 ttacgccaat tggtcaggta gcattaagtt gacattcatg ttttgtgggt cagcaatggc
2101 cactggaaag tttctgttgg cctattcccc accaggagca ggggtacctg ggagcagaaa
2161 ggaagccatg cttggaacac atgtagtttg ggacataggg ttgcaatcta gttgtgtttt
2221 atgcgtgccg tggatcagcc agacacacta caggtatgtg gagcacgatg tgtacaccga
2281 tgcaggatac ataacgtgtt ggtaccaaac tagcatagtg gtaccagtgg atgttgccac
2341 caccagcaaa attttgtgtt ttgtgtcagc gtgtaatgac ttttctgtga ggctgttgag
2401 agacactcct ttcttaacac aaaccgcttt atatcaaagt gaccccaacg acagggaaac
2461 tgtgactgac actgcaccaa gtgggcaaac aaattcaacg cgaataccag cactgacggc
2521 agcagagaca ggacacacct ctcaagttgt ccccagcgat acgatgcaga caagacatgt
2581 aaataacttt cacaccaggt ctgaatcatc aattgaaaac tttttgtgta gggcagcttg
2641 cgccacgatt gtcacataca acaccaatgt aagtgacaac tttactagtt ggcgtattaa
2701 cacgagagag gtagctcaac tcaggcgtaa gctagagatg ttcacataca tgagatttga
2761 tctcgaattg acctttgtca taactagcac ccaagctgat gggaccaacc aagctgcgga
2821 caactcagta ttgacccatc aaatcatgta tgtgccacct ggaggcccaa tccctaacaa
2881 ggtcgacgat tattgttggc aaacatccac caatcctagt gtgttctggt cagagggctg
2941 cgccccacca cgcatgtcca tccccttcat cagtataggc aatgcatata gtatgttcta
3001 tgacgggtgg tcacacttct cccagactgg cctgtatgga tacacatccc tcaataacat
3061 gggacaactt tttttccggc atgtgaacaa agcgacggtg cacaactata gtagtgtggc
3121 acgcatatac ttcaaaccaa aacacataaa agcatgggtt ccgcgccctc cacgcctatg
3181 tgattacatg tacaaggcca atgtggactt caagacacag gcagtgacgg accaacgcgg
3241 agaccaccgg ataagcaagg atgaccacct ccccgaaatg caaaataccg gtgcatttgg
3301 acagcaatct ggtgctatat atgtagcaaa ctacagggtg gtcaacaggc acctggccac
3361 tcacactgat tggcagaact gcgtatggga ggactacaac agggacctat tggtcagcac
3421 taccacagct cacggatgtg atactatagc cagatgccag tgcacaacag gtgtgtactt
3481 ttgtgcctca agaaacaagc actatccagt ttcatttgag ggtccgggtc ttgtcgaggt
3541 ccaagaaagt gagtattacc ctaaaagata ccaatcccac gtgctgctcg ctgcggggtt
3601 ctctgaacca ggtgactgtg gtggaatact cagatgcgag cacggtgtca ttggtctagt
3661 taccatgggt ggcgagggtg tggttggctt tgctgatgtg cgtgatctct tgtggctaga
3721 ggatgatgca atggagcagg gagtgaagga ctatgtggaa caacttggta atgcttttgg
3781 ctctggtttc accaaccaga tttgtgagca agtaaacatt ctaaaagaga cacttgtagg
3841 ccaagactcc attctggaga aatcactgaa agccttagta aaaataattt cagccttagt
3901 gattgtagtg aggaatcacg atgatttaat cacggtgact gccacactgg cactcattgg
3961 ttgcacctcg tctccatggc gttggcttaa acaaaaagta tctcagtact atggaatacc
4021 aatggctgaa cgccaaaaca atggatggct aaagaagttc actgagatga caaatgcttg
4081 taagggtatg gagtggatag ccatcaaaat ccagaaattc attgaatggc tcaaggtcaa
4141 agtactacca gaggtccggg aaaagcatga atttctaaac agactcaagc aactccccct
4201 gttagagagt caaatcgcca caattgagca aagtgcacct tcccagagtg atcaggagca
4261 attgttttcc aacgtccaat actttgcaca ctactgcagg aagtatgctc ccctctatgc
4321 atcagaagca aagagagtgt tctcccttga aaagaagatg agtaattaca tacagttcaa
4381 gtccaaatgc cgtattgaac ctgtatgttt gctcctgcac gggagccccg gagctggtaa
4441 gtcggtggcg accaacctga ttggtaggtc gcttgctgaa aagctgaaca gctcagtgta
4501 ctcattacca cctgacccag accactttga cggctacaag cagcaggccg tggtgatcat
4561 ggatgacctg tgtcagaacc ctgatggaaa ggatgtctcc ctgttttgtc aaatggtttc
4621 cagtgtggac ttcgtgccgc ccatggccgc cttggaggag aaaggcatcc tgttcacatc
4681 tccattcgtc ttggcatcaa ccaatgcagg gtccatcaac gctccgacag tatcagacag
4741 tagggccttg gcaaggagat tccatttcga catgaacatc gaagtcattt ccatgtacag
4801 ccaaaatggc aagataaaca tgccaatgtc agtgaagacg tgtgacgagg aatgctgtcc
4861 agtcaatttt aagaagtgct gcccgctggt gtgcgggaag gccatccaat tcatagacag
4921 aaaaacccaa gttaggcact cccttgatat gctagtgact gagatgttta gggaatacaa
4981 ccacaggcac agcgtcgggg ccaccctaga ggcattgttc cagggaccac cgatatacag
5041 ggaaataagg attagtgtgg caccagaaac accgccgcca ccagccattg cagatttgct
5101 taaatcagtg gatagcgagg ctgtgaggga gtattgcaaa gaaaagggat ggttagtacc
5161 ggagaccaat tccaccctgc aaatcgaaaa gcacgtcagc agggccttca tttgcctgca
5221 agcattgacc acttttgttt cagtggcagg gatcatctat ataatctaca agctcttcgc
5281 aggtttccaa ggagcgtaca cgggaatgcc taaccagaag cctaaagttc ccacgctaag
5341 acaagcaaag gtacaaggac cagcattcga attcgctgta gccatgatga agaggaactc
5401 aagcacggta aaaaccgagt acggtgagtt caccatgttg ggcatttatg acaggtgggc
5461 cgtcttaccg cgccacgcca aacctggacc aaccatactc atgaatgatc aagaggttgg
5521 tgtactagac gccaaggagt tggtagacaa ggacggtacc aacctggaac tgacactact
5581 caagctaaac cggaatgaga agttcaggga catcagaggc ttcctggcca aggaagaggt
5641 agaggttaat gaagccgtgc ttgcaattaa caccagcaag ttccccaata tgtacatccc
5701 cgtagggcag gttacggact atggcttcct gaacctgggc ggcataccta caaagagaat
5761 gcttatgtac aacttcccca cgagagccgg acagtgtggt ggtgtgctca tgtccactgg
5821 caaggttcta ggaattcatg ttgggggaaa cgggcaccaa ggcttctcgg ccgctctcct
5881 caaacactat ttcaatgatg agcaaggaga gattgagttt atcgaaaact caaaagacgc
5941 gggattcccg gttatcaata cacctagcaa gaccaaatta gagcccagta ttttccacca
6001 agtcttcgaa ggcaacaagg aaccagcagt cctcagaaac ggtgacccgc gccttaaagc
6061 caactttgag gaggctatct tctccaagta catcggaaat gtcaacacac acgtggatga
6121 gtacatgttg gaagctgtcg accattacgc tggacaattg gccaccctag acatcagcac
6181 cgagccaatg aagttagagg atgcagtgta tgggactgaa ggccttgaag ctctcgattt
6241 aacaacaagt gcgggctacc cctatgttgc gctgggcatc aagaagagag acatcctctc
6301 aaaaaaaact agggatttga ccaaactgaa agagtgtatg gacaagtatg gcttaaactt
6361 accaatggtg acctatgtaa aggatgagct tagatccgtg gagaaggtag caaaagggaa
6421 gtctaggctg attgaagcat ccagtctcaa cgattcagta gcaatgagac agacatttgg
6481 caatttgtac aagaccttcc acttgaaccc ggggatcgtg actggtagtg cagtcgggtg
6541 cgacccggac ctcttctgga gcaaaatacc agtgatgttg gacgggcatc tcattgcatt
6601 tgattactct gggtatgatg ctagcttaag tcccgtctgg tttgcctgtc tgaaaatgtt
6661 acttgagaag cttgggtaca cacacaagga gacaaactac attgattact tgtgtaactc
6721 ccatcacttg tacagggata agcattactt tgtgaggggt ggcatgcctt cagggtgttc
6781 tggcaccagc atctttaact caatgatcaa caacatcata atcaggacat tgatgctgaa
6841 agtatacaag ggaattgact tggatcaatt caggatgatc gcgtatggtg atgatgttat
6901 cgcatcgtac ccgtggccca tagatgcatc cttactcgcc gaggctggca gggactacgg
6961 gctgatcatg acaccagctg ataaggggga acactttaac gaagtcacct ggaccaatgt
7021 cactttctta aagaggtact ttagggcaga tgagcaatac cctttcttgg tgcaccctgt
7081 catgcccatg aaagatatac atgagtcaat cagatggacc aaagatccaa agaacaccca
7141 agaccacgtg cgctcactat gcttattggc ctggcacaac ggagagcacg aatatgagga
7201 gttcattcgt aaaatcagga gcgtcccagt cgggcgttgc ttgaccctcc ccgcgttttc
7261 gaccctacgc aggaagtggt tggactcctt ctaaatttga gacaatttga tacaatttaa
7321 attggcttaa ccctactgca ctaaccgaac tagataacgg tgcagtaggg gtaaattctc
7381 cgcattcggt gcgg
//
