LOCUS FJ492743 7810 bp DNA circular VRL 21-OCT-2009
DEFINITION Canine papillomavirus 5 isolate Birkenfeld, complete genome.
ACCESSION FJ492743
VERSION FJ492743.1
KEYWORDS .
SOURCE Canis familiaris papillomavirus 5
ORGANISM Canis familiaris papillomavirus 5
Viruses; Monodnaviria; Shotokuvirae; Cossaviricota;
Papovaviricetes; Zurhausenvirales; Papillomaviridae;
Firstpapillomavirinae; Chipapillomavirus; Chipapillomavirus 1.
REFERENCE 1 (bases 1 to 7810)
AUTHORS Lange,C.E., Tobler,K., Ackermann,M., Panakova,L., Thoday,K.L. and
Favrot,C.
TITLE Three novel canine papillomaviruses support taxonomic clade
formation
JOURNAL J. Gen. Virol. 90 (PT 11), 2615-2621 (2009)
PUBMED 19656968
REFERENCE 2 (bases 1 to 7810)
AUTHORS Lange,C.E., Tobler,K., Ackermann,M. and Favrot,C.
TITLE Direct Submission
JOURNAL Submitted (26-NOV-2008) Dermatology, Vetsuisse Faculty University
of Zurich, Winterthurerstrasse 260, Zurich, Zurich 8057,
Switzerland
FEATURES Location/Qualifiers
source 1..7810
/organism="Canis familiaris papillomavirus 5"
/mol_type="genomic DNA"
/isolate="Birkenfeld"
/host="Canis lupus familiaris"
/db_xref="taxon:658422"
/country="Germany"
/collection_date="Sep-2007"
CDS 422..880
/codon_start=1
/product="E6"
/protein_id="ACU27450.1"
/translation="MERPWSLAGLSLRSGVPFCHLHVPCVFCGIPLDYEDRVAFDYKA
FQVTWKNGQPHGFCTRCSRNLAQHEVGFFTQEELTYKEFVQRLGAGFYYVPVRCTICY
GLVTATQKIEALYRRQTFKKVRGRWRTPCNNCAQSDNNDWERRYFERYSP"
CDS 840..1142
/codon_start=1
/product="E7"
/protein_id="ACU27451.1"
/translation="MIGKDATLRDIVLEEQPTPLDILWCDEELTPSDDEEEEPTSNQN
LSPFRIQTHCGTCERGIRIVVLCTQEGIHCLETLLCNNTSFCCPVCAATYKFDHGR"
CDS 1132..3021
/codon_start=1
/product="E1"
/protein_id="ACU27447.1"
/translation="MDGELDSGTDPEEGTSSGGLILREAECSDMDTSEDADEDDDMGD
FINDNLEGQCSQGNSQALLHQQRAREDNRQVQVLKRKYASPKQKVDSDLSPRLRAITI
SPPKQTAKRRLFSHSVDSGLEASGENETGNSIETDSDQVDAVMLVGEEDERLGRTPPQ
GGFRMRGGSQALLTQLMKSSNQRATQYALFKKGYGISLSELTRPFKSNKTCNPDWVAV
GFGVHHNTYNDIVQRLEKHCEYVQLLGNAGSAGYIVLLLMRFTAHKSRDTLKKLLKNI
LNVSDAQLILDPPKVRSVAAALYWYRNSMSTAVQTHGTLPEWVTRQTLVQHHCGEEAK
FVLATMVQWAYDNDHTEESDIAYHYALLADEDANAAAWLGTNSQAKHVRDCSVMVKHY
KRAIMASLSMSEWINRRINLIDEEGDWKHIGNFLRFQCVEVIAFIGALKNMLKKIPKK
TCICIVGPPDTGKSAFCLSLLEFFGGKVISFTNYKSQFWLQPLADTRLALLDDATKTT
WDYIDAYLRNALDGNTICLDLKHKAPLQIRCPPLLITTNIDIRENDRWRYLYSRIYTV
EFKYAFPFNEEGEPVYQLTKGNWKSFFKRLWSRLDLSEQEDEGEDGEPDKAFRCDTRR
APDHL"
CDS 2963..4432
/codon_start=1
/product="E2"
/protein_id="ACU27448.1"
/translation="MESLTKRLGAIQDALLTIYEEGSDRLSDQVQHWNLLRKENVLLH
YAKKAGILRLGLQPVPALRVSAEKAKQAIGMQLVLQSLQNSAYATEQWTLQDTSYERW
MAEPSSCLKKGATYVEVYFDGDRANSMQYTMWHHVYFTDWTDTWQKTRSHVTSDGLWF
WDNGERRYYVRFEDEAKKYATTGKWDVMFNNEPICPLESVTSTTPSTNLGAKTSVPVD
WEPRRVAGGGGTAGPTGQGNWRAPQRDTWQAADSTETPSFTAPEVTQAEEEQVPCEEA
PGVGGGLAVSGSLCSDPAVSESCRDPRGLLVSEYTGVSSGAEPLSRCVSPESGSGQPG
TLQAPAAPEPGLGHFPAASAANTPAPAGPEANPAAAEGGPREGAEAGFQGRFPAASRP
RRRPRQILREAGDSSTSVIVLSGPSNVLKCFRYRAKQMHKGCFCMISTTWYWAGDGSE
RIGNARILVTFSSNSQRAEFLDRVRLPSSVTLLDSIHTF"
CDS 3429..4193
/codon_start=1
/product="E4"
/protein_id="ACU27449.1"
/translation="MDSGSGTMVKGGTMYGSRMRPKSMQQRESGMLCLTMNLFALLNL
LPAPHRPQTLVQRLLFLLTGSHDGWPEEVELQDLQDRETGEPRRGTRGRPPTPQRPPP
SPPPRSRRRRKNRSPVRRPPEWEEDLQYLGACALTPPLASPAETPEDCWYPSTQESPP
VLSPCPGASPPSQGPDSPEHYRHPRPRSPDWDTFQPLPRPTPLPLPDQRPTLQQQKEA
LEKALRQVSKDAFQLQVDLDADLGRFFGKLGIAPRQ"
CDS 4628..6145
/codon_start=1
/product="L2"
/protein_id="ACU27453.1"
/translation="MVRARRTKRASAADLYKTCKAANTCPPDVINTYEHKTVADKILQ
IGGAAVFFGGLGIGTGAGKGGATGYTPLGGRVSSGVTVGTGTRVVRPPVPIDVLGASE
VVPVDALAPSVVPLHEAVPEIPLLEITPGEPTGLPTVPLEVPVDTSGSSFDAGPVRVT
VHAVVEPVPSTPPVRTSVSWSQHSNPAFDILPDSNNSLGETSSSSNILVTHSNGGVSV
GVSEEIPLQVFRTSTPRSTPVRPATARRGGYPRRFIEQVDISDPGVLEDPGRRVQFDF
DNPAFEGTLEFEPPPYPEVRAAPDPRFRDILKLSSTRYGQTESGHVRIARTGIRGTIT
TRSGVQLGSQAHFYHDISTLTVPEEIELTALGEHSGTTVVVSGGGSESAMEVIDLDSS
SFSSIGLDSDDLEALLGVEDLPAFENLRLEFPMRRNRVTLDLPTRNLAMPGPLDINQE
VYVDYPGSDSGGVYGPFGPEPPLVIADITMGEGTDYYLHPSLTRKRRRRRRRRSL"
CDS 6167..7672
/codon_start=1
/product="L1"
/protein_id="ACU27452.1"
/translation="MAVWVSNSQKLFLPPNPVSKVLHTDTYVKRTSVFCHAGSDRLLT
VGNPFFSILDEDQKTVKVPKVSSNQYRVFRVSLPDPNQFAFAERPTHDPEKERLVWGL
RGMDVGRGQPLGIGVTGHPLFNRFSDVENPGKYQDKAQPKDSRQNVGFDAKQTQVLIV
GCTPAMGEHWESAPACNGAVKGSCPPLELRNTVIQDGDMLEIGYGAMDFRNLSRNRSD
APLDIILSISKYPDYLKMSKEASGDSMFFFARREQEYIRHFFTREGKVGEDVPEALMY
PADDSQPQKTNLGTPVYYGAPSGSLTSSDSQIFNRPYWLQRSQGLNNGICWLNQLFVT
VGDTTRGTNMTISVSNEADPEKYDSSKFSVYLRHTEEFELSFIFQLCIVPLTPDVIAQ
LHSLNPLILDKWNIGLQPPTATLLEDKYRYIDSLATRCPSKVPPKPSEDPYSGLTFWM
VDLTEKFSQDLDQFPLGRKFLAQSNLSTTRKRARSPSTSKSTRTVKKKKSK"
ORIGIN
1 gcacctggat atttctggca gtacatccac cgctcccggt gcagacggct tctgccaagc
61 tactcggtgt tctgccaaac gtcggcttag atgactgatc aacacggtgt ggcgccaact
121 ggcaggatta aagctttcta atcttttttg gcgcggattc tgcagcggct tccagaccgg
181 cagcggttgc tgcatacaga ataggcttgg gttctactgc caactaaggc ttatctgatg
241 gattaaacgg gagcggttcc actgaccgcc ggcggtacag gtaaagactt ctactctcta
301 tattgttgtt agcaacaaca acaaccgttt gcggttaagt gacgttgtac cgtcaacggt
361 catcttggcc atgccaattt tctagctatt tattgacaga aaaaccgttg cgaggcgggc
421 tatggagcgc ccatggagcc ttgcaggtct tagcctgcgt tcaggagtgc ccttttgtca
481 tctacatgta ccctgtgtgt tctgtgggat acccttagac tatgaggacc gtgtagcctt
541 tgattataag gcattccagg taacctggaa aaacggacag ccacacggat tttgcacccg
601 ttgttccaga aatcttgcac agcacgaggt gggatttttt acccaagagg agctgaccta
661 taaggaattt gttcagagac ttggtgcagg attttactat gtgcctgtga gatgcacaat
721 ttgttatgga ctagtgaccg ctacccagaa gattgaagcc ctttacagaa ggcaaacatt
781 caaaaaggtc agagggcggt ggcggacgcc ctgcaacaat tgtgcacaat ctgataataa
841 tgattgggaa agacgctact ttgagagata tagtccttga ggagcaaccc acaccacttg
901 acattctctg gtgtgatgag gagctaacac cgtccgatga tgaggaggag gagccgacct
961 ccaatcaaaa cctgagtcca tttagaatac aaacccattg tggcacctgc gagcgaggga
1021 tcaggatcgt tgtgctgtgc acccaggagg ggatccactg cctagaaacc ctgctgtgca
1081 acaacacatc attctgctgt ccggtctgcg cagccaccta caaatttgac catggacggt
1141 gaactagatt caggtacaga tcctgaggaa ggcacaagtt cggggggact tatattgcgg
1201 gaagcagagt gtagtgacat ggatactagt gaggatgcag acgaggacga cgacatgggt
1261 gactttatta atgataacct ggagggacag tgtagtcagg ggaattccca agctttattg
1321 caccagcaga gagcgaggga ggacaatagg caggtacagg tcctaaaaag aaagtatgca
1381 agtccgaaac agaaagtgga ttcagaccta agccccaggc ttagagctat aacaatatca
1441 ccacctaaac aaacagcaaa gcgcaggtta ttttcacaca gtgtagacag cgggctggag
1501 gcgtcgggag aaaatgaaac tggcaattct attgagacgg actccgatca ggtagatgcg
1561 gtcatgttgg tgggcgagga ggacgaacgt ctgggccgta cccctccgca gggcgggttt
1621 agaatgagag gggggtcaca ggcattattg acacagctaa tgaaatcctc taatcagaga
1681 gctacgcagt atgcattgtt taaaaagggg tatggtatta gtctttcgga gttgaccagg
1741 ccatttaaaa gcaataagac atgtaatcct gactgggtcg cggtgggctt tggcgtgcat
1801 cacaatacct ataatgatat tgtacagaga ctagaaaaac attgtgaata cgtgcagctg
1861 ttagggaatg cagggtccgc ggggtatata gttctcctgt tgatgagatt cactgcacac
1921 aaaagcagag acacgttaaa aaaactgcta aaaaatatat tgaacgtgtc ggacgcacag
1981 ctcatactag accctccaaa agttagaagt gttgcagctg cattatattg gtatagaaat
2041 agtatgtcca ctgctgtaca aacccacggc accctaccag agtgggtgac acgacaaaca
2101 ctagtacagc accattgcgg cgaagaggca aaatttgttt tggcaaccat ggtgcagtgg
2161 gcatatgaca atgaccacac agaggagagc gacatagcct atcactatgc attactagca
2221 gatgaggatg ctaatgccgc cgcatggcta gggacaaact cgcaggccaa gcatgtcaga
2281 gactgctctg ttatggttaa gcattataag agggcgataa tggcgtcatt atctatgtcg
2341 gagtggataa atagaagaat aaatctgata gatgaggaag gggactggaa gcacataggg
2401 aactttctta gattccagtg tgtagaagtg attgcattta taggagcgct gaaaaacatg
2461 ctaaaaaaaa tacctaaaaa aacctgcata tgtatagtgg gccccccgga tacggggaag
2521 tcagcttttt gcctaagcct gctagaattc tttgggggaa aggtgatatc attcacaaac
2581 tataaaagcc aattttggct gcagccatta gctgacacca gacttgcctt gctagacgat
2641 gctactaaaa caacgtggga ttacatcgat gcgtatctaa gaaatgcgct ggacggaaat
2701 actatttgcc tggaccttaa acataaggct ccattgcaaa taagatgtcc gccattgctt
2761 attaccacaa acattgacat tagagagaac gacagatggc gctacctata tagcagaatc
2821 tacacagttg aatttaagta tgcctttccc tttaacgagg agggcgagcc tgtgtatcaa
2881 ttaacaaaag gtaactggaa atcgtttttc aaaaggttgt ggtcacgatt agacctaagt
2941 gagcaagagg acgaggggga agatggagag cctgacaaag cgtttaggtg cgatacaaga
3001 cgcgctcctg accatttatg aagagggcag cgaccggctg tcagatcagg tccagcactg
3061 gaacctgctc aggaaggaaa atgttctgct ccactatgcc aaaaaggccg gtatcctaag
3121 gctagggctg caaccggtgc cagctctgag agtgtcagcc gaaaaagcga agcaggctat
3181 agggatgcag ctggtattgc aatctctgca gaactctgca tacgccacgg agcagtggac
3241 attacaggac acgagctacg agaggtggat ggcagagcct agcagctgtc taaaaaaagg
3301 agcaacatac gtggaggtgt attttgatgg ggacagggct aattcaatgc aatatactat
3361 gtggcaccac gtgtatttca cggactggac agatacatgg cagaagacac ggagccacgt
3421 aactagtgat ggactctggt tctgggacaa tggtgaaagg aggtactatg tacggttcga
3481 ggatgaggcc aaaaagtatg caacaacggg aaagtgggat gttatgttta acaatgaacc
3541 tatttgccct cttgaatctg ttaccagcac cacaccgtcc acaaaccttg gtgcaaagac
3601 ttctgttcct gttgactggg agccacgacg ggtggccgga ggaggtggaa ctgcaggacc
3661 tacaggacag ggaaactgga gagccccgca gagggacacg tggcaggccg ccgactccac
3721 agagaccccc tccttcaccg cccccgaggt cacgcaggcg gaggaagaac aggtcccctg
3781 tgaggaggcc cccggagtgg gaggaggact tgcagtatct gggagcctgt gctctgaccc
3841 cgccgttagc gagtcctgca gagaccccag aggactgctg gtatccgagt acacaggagt
3901 ctcctccggt gctgagcccc tgtccaggtg cgtctccccc gagtcagggt ccggacagcc
3961 cggaacacta caggcacccg cggccccgga gcccggactg ggacactttc cagccgcttc
4021 cgcggccaac acccctgccc ctgccggacc agaggccaac cctgcagcag cagaaggagg
4081 ccctcgagaa ggcgctgagg caggtttcca aggacgcttt ccagctgcaa gtagacctag
4141 acgccgacct aggcagattc ttcgggaagc tggggatagc tccacgtcag tgatcgttct
4201 ctctggacct agcaacgtgc ttaagtgctt caggtaccgg gcaaagcaaa tgcacaaggg
4261 ctgcttctgc atgattagca ctacatggta ctgggcaggg gacgggtctg aaaggattgg
4321 aaacgcgagg atacttgtga ctttttcaag caactcacaa agggctgaat ttctggaccg
4381 cgtgcggttg ccctcctcag tgaccttgct agactccatc cacaccttct agccacgcct
4441 accagcgaaa aaaaaaactg agctgctgag tcagccattt gcggcagcca ttttgagact
4501 ttgatcttgt gtcctggaca tttccagcct ttgctgactt ttatttacca tacccccatt
4561 tttgtacttt tataacaaac taaccaagcg cgtatcggcc acctgacttg tcacctgttg
4621 acctgtcatg gtacgagcgc gcagaacaaa aagagcgtct gctgcagacc tctacaaaac
4681 ttgcaaagca gctaacacgt gtcctccaga tgttatcaat acctatgagc ataagacagt
4741 tgctgataaa attttgcaaa ttggaggtgc tgcagtattt tttgggggac tcggtattgg
4801 tacaggggct ggaaaagggg gcgccacagg atatacacct ctcggtggga gggtgtcttc
4861 cggggtcact gttggtacgg gtactcgtgt tgtacggcct cctgtaccca ttgatgtgct
4921 tggcgcaagt gaggtggtac ccgtggatgc acttgcaccg tctgtggtcc ccctgcatga
4981 ggcagttcct gaaatacctc ttctggagat tacccctgga gagcccactg gcttgccgac
5041 tgttccttta gaggtccctg tggacacttc ggggtcttcc tttgatgccg gtcctgtgcg
5101 tgtcacggta cacgcagtgg tagagccagt accaagcacc cccccagtca gaactagtgt
5161 cagctggtca cagcactcca atccagcgtt tgatatactg cctgacagca ataacagtct
5221 tggtgagacc tcctcctcca gtaacatctt ggtcacccat agtaacggtg gtgtttctgt
5281 tggggtctcc gaggagattc ccttacaagt gtttcgcaca agcactcctc gcagcactcc
5341 tgtacggcct gcaactgcta gacggggggg gtatcctcgc aggttcattg aacaggtaga
5401 catttcagac ccgggggtgc ttgaggaccc cggacgacgt gtgcagtttg attttgataa
5461 cccagctttt gagggcacac tggaatttga accccctccg tacccagagg tccgagctgc
5521 ccctgaccct cgatttcgag acatactaaa gctctcttct acccggtatg gccaaacaga
5581 gtcgggtcat gtgaggatag caagaacagg aatacggggc acaatcacca cacgcagtgg
5641 tgtgcaattg gggtctcagg cacattttta ccatgacata agcaccttga cagtccctga
5701 ggaaattgaa ctaacagcac ttggagagca ttctggaacc acagtggtag tttcgggggg
5761 tggttcagaa tctgcaatgg aggtgattga tctggacagt tctagctttt catctatagg
5821 tcttgactct gatgacctgg aagctttact tggtgttgag gaccttccag catttgaaaa
5881 tctcaggctg gaatttccta tgagacgtaa cagggtgacc cttgacctac caacaaggaa
5941 tctggctatg cctgggcctc tagacataaa ccaggaggtt tatgtagatt acccgggatc
6001 tgattctggg ggcgtgtatg gcccctttgg acctgagcct cctctggtta ttgcagacat
6061 aacgatgggg gagggtactg attactatct acacccctct ctcacacgta aacgcaggcg
6121 ccgtcgcagg cgcaggtcac tgtgatcttt tcttttttct ttacagatgg ccgtgtgggt
6181 ttcaaacagc cagaagcttt tcctgccccc taaccctgtt tctaaggtct tgcacactga
6241 cacttatgtt aaaagaacat ctgtgttttg tcatgcaggt tctgatagac ttctgacagt
6301 aggaaaccca ttttttagta tattagatga ggaccaaaaa actgtcaagg ttcctaaggt
6361 ctccagtaat caatataggg tatttagggt atctctccct gacccaaacc aatttgcatt
6421 tgcagagcgt cccacgcatg atcctgaaaa ggagagactt gtttggggcc tccgtggtat
6481 ggatgttggt cgtgggcaac cgttgggaat tggggtgaca ggccaccctc tttttaatag
6541 attctcagat gtggaaaatc ctggtaagta tcaggacaag gcccagccca aggattcaag
6601 acagaatgta ggttttgatg caaagcaaac acaggtttta atagtgggat gcacaccggc
6661 catgggtgaa cactgggaat ctgcacccgc ctgtaatggt gcagttaaag gctcctgccc
6721 ccctctcgag ctgcgtaaca cagtaattca ggatggtgac atgcttgaga taggttatgg
6781 tgcgatggac tttagaaacc tctccagaaa caggtccgat gcacctttgg acatcatact
6841 ttccatctcc aaatatccag attaccttaa aatgagtaag gaggctagcg gtgactccat
6901 gtttttcttt gcacgcaggg aacaggagta cattaggcac ttttttacca gggaaggtaa
6961 ggttggggag gatgtcccag aggccctgat gtatcctgcc gatgacagtc agcctcaaaa
7021 aactaattta ggcacccctg tttattatgg ggctcctagt gggtccctta catctagtga
7081 ttctcagata ttcaaccgtc catactggct tcagcgctct cagggcctga acaatggtat
7141 ttgctggctc aatcagttgt ttgtcactgt tggtgacact acacgtggca caaatatgac
7201 aattagtgta tctaatgagg ctgaccccga gaagtacgac tcctccaagt tcagcgtgta
7261 tcttcgccat acggaggagt tcgaactctc attcatcttt cagctatgca ttgtccccct
7321 aactccggat gtgattgccc agttacatag cctgaatcct cttatacttg acaaatggaa
7381 tataggcctg cagccaccca ctgcaacatt gttggaggac aagtataggt acatagactc
7441 tcttgctacc agatgtccca gcaaggttcc ccctaaacct tctgaggacc cctacagtgg
7501 ccttactttt tggatggttg atcttacaga aaagttctca caggacctgg atcaatttcc
7561 tctgggacgt aagtttttag ctcaatctaa tctatccacc actcggaagc gcgcgcggtc
7621 cccctctact tctaaatcta cacgaactgt aaaaaagaaa aagagcaaat aaacacattt
7681 tattttttct ctgtgcgtga gcatgctcat gtttttgcaa agctctgtca gcactcttac
7741 agtggttcgg gcccccttcc agcattcctc ggtcaaccgc acccggttgc gcccgggtga
7801 ctaaaaccgt
//
