LOCUS KJ486491 4615 bp DNA linear VRL 12-MAY-2015
DEFINITION Chicken parvovirus isolate ADL120686, complete genome.
ACCESSION KJ486491
VERSION KJ486491.1
KEYWORDS .
SOURCE Chicken parvovirus
ORGANISM Chicken parvovirus
Viruses; Monodnaviria; Shotokuvirae; Cossaviricota;
Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae;
Aveparvovirus; Aveparvovirus galliform1.
REFERENCE 1 (bases 1 to 4615)
AUTHORS Koo,B.S., Lee,H.R., Jeon,E.O., Han,M.S., Min,K.C., Lee,S.B.,
Bae,Y.J., Cho,S.H., Mo,J.S., Kwon,H.M., Sung,H.W., Kim,J.N. and
Mo,I.P.
TITLE Genetic characterization of three novel chicken parvovirus strains
based on analysis of their coding sequences
JOURNAL Avian Pathol. 44 (1), 28-34 (2015)
PUBMED 25510852
REFERENCE 2 (bases 1 to 4615)
AUTHORS Koo,B. and Mo,I.
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2014) School of Veterinary medicine, Chungbuk
National University, Seongbong street, Cheong Ju, Chungbuk 361-763,
Republic of Korea
COMMENT ##Assembly-Data-START##
Assembly Method :: MEGA v. 6
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4615
/organism="Chicken parvovirus"
/mol_type="genomic DNA"
/isolate="ADL120686"
/host="Gallus gallus"
/db_xref="taxon:1136878"
/country="South Korea"
/collection_date="22-Mar-2012"
CDS 1..2085
/codon_start=1
/product="NS1"
/protein_id="AJB28748.1"
/translation="MAFPTRGGFSAILNLPSDLIVGQKNMPVFECVTAGYTSPDSGEF
VASRFPPNHELRQEIRNFIGNPEWDDPDLTWIDFHIQLAKHAIDVETKLNPNLQIFWQ
MEKSSQSGRYHLHLLFVEGCTSRQITWIVKRMRRELCNKAAEMLHMFCPDFPKSQIWG
SLVNIQNAMLSLNRGYSPRIGKPIPQPVNPYSFLKYYMFNSAKMSFLRGATPKLAEKL
PMGTRYARFEGSPDLDEGPEIPSQELTPGDTLPVCYVSTETDWGNGGGETVIKTSIIE
KLCMEALRLCRENHIFTMKTFKLKFPDKFMQFSSRNQGLVKLDETINLYCETIIHDHN
AWEIAKSIHGDIDTSDLDDNLAIRLCSFQGYSPKYVARLILCWLSGQAGKKNALYFHG
PANTGKTMMAESICKMVQIYGNVNHNNKNFPFNDCHNKAVLWWEECSMTDEHVESAKC
IMGGSSVRIDKKNQDSVLLCKTPIVITSNNDITQVSSRNAISTVHAAAIRARCLKFTF
NNWLTSNWGLITVEQMYQFLCWGELEGIPNVDSLLKDHPEFNGTLPYNQPKGKFCADC
VNQFSTATNLTVCPACSGWTRKPFSEEEEPPYTGSESGLFEKANEGKNEVPGIYPVNS
GSRLIPEAPILQKPSTCWETEILSESSGFPDEPDFTASAKLLLKVDDLHLESDLTVEQ
DPLECKKCCLVQ"
CDS 2286..2591
/codon_start=1
/product="NP1"
/protein_id="AJB28749.1"
/translation="MCWYRNNIAQIETVEGDPCTNANVFHELYLPIKQHAMDARMLKM
KIEDKILKGDFSHDVHLDMTLTQCIQTTLSDNPAGIWPCVDRLANYCNVILASIGTQ"
CDS 2588..4615
/codon_start=1
/product="VP1"
/protein_id="AJB28750.1"
/translation="MKYKAPKGYVPSLPTTDEEAYHHTRWWLDHVENYGKNKSIGRGK
GKARKELTPQQKAERKRFFITQAQKNKKPNYGIPSSSQHKEFFKNHQGAQGGKAKQKT
KHLESQAPQRQEDPEEGPAPKQPRVEEHPFNQEELEEMMADENEPDQSGIPMEMSDGP
GTVGGGGGGGIGHSTGNWNCDTIWSGNTCTTYASRHCVCLMRDLDQYKAIGNTNGQHG
LNSENQTQYFGFSTPWNYIDFNQYSVHFSPRDWQHLVNNYSRWRPRAVHVKIFNLQVI
QKTVTDSGTQYSNDLTGTIQIFADQEGKYPRLLYPNQTTLMGPFPSNIYYLPQYAYMT
SMYNSGGATPTSWWGFPTRESAFYCLDESPSQMLRTGNEWETTFVFPPSTQWCNNRIS
TVSITQRQNPLYDTWNVNGRGDDAQRGNFCTWRSPWYPGPYIYLTDTTAATQTLENLA
NVAVGPDGMPLAPGMPQYRPETDKDEYLHTFWIPKKIGMNEGDVRNSQIQASTANKVQ
VDTSSLYNTCPRSGYNSTVSQGGAPAPIVWSGCVPGMIWDNRPATYFDPIWQQFPETD
EQFKIVSQLGGIPVKQSPGHIFVKVTPKPTGAANGYIDEYCTFTCTVEIDWELEPINT
HRWNMRSMISYETTDAKAGRQIVDENGQYQLNINSADITRLYSTKRAPRTN"
CDS 3005..4615
/codon_start=1
/product="VP2"
/protein_id="AJB28751.1"
/translation="MMADENEPDQSGIPMEMSDGPGTVGGGGGGGIGHSTGNWNCDTI
WSGNTCTTYASRHCVCLMRDLDQYKAIGNTNGQHGLNSENQTQYFGFSTPWNYIDFNQ
YSVHFSPRDWQHLVNNYSRWRPRAVHVKIFNLQVIQKTVTDSGTQYSNDLTGTIQIFA
DQEGKYPRLLYPNQTTLMGPFPSNIYYLPQYAYMTSMYNSGGATPTSWWGFPTRESAF
YCLDESPSQMLRTGNEWETTFVFPPSTQWCNNRISTVSITQRQNPLYDTWNVNGRGDD
AQRGNFCTWRSPWYPGPYIYLTDTTAATQTLENLANVAVGPDGMPLAPGMPQYRPETD
KDEYLHTFWIPKKIGMNEGDVRNSQIQASTANKVQVDTSSLYNTCPRSGYNSTVSQGG
APAPIVWSGCVPGMIWDNRPATYFDPIWQQFPETDEQFKIVSQLGGIPVKQSPGHIFV
KVTPKPTGAANGYIDEYCTFTCTVEIDWELEPINTHRWNMRSMISYETTDAKAGRQIV
DENGQYQLNINSADITRLYSTKRAPRTN"
ORIGIN
1 atggcattcc caacacgcgg tgggttttcc gctattctaa atcttcccag cgatttgatc
61 gtgggacaga aaaatatgcc tgtattcgag tgtgtaactg ccggttacac ttctccggat
121 tcaggcgaat tcgtggcttc tagatttcca ccaaaccacg aattgagaca agaaattagg
181 aattttatcg ggaatccaga atgggacgat ccagatctga catggataga tttccacatt
241 caattggcaa aacacgccat agacgtggaa accaaactca atccaaattt acaaattttc
301 tggcaaatgg aaaaatctag tcagtcggga agatatcatc tccatttact attcgtagaa
361 ggatgtactt ccaggcaaat tacatggata gtcaaaagaa tgagaaggga actttgcaac
421 aaagctgcag aaatgttgca catgttttgt cctgatttcc ccaaaagcca aatttgggga
481 tcgctggtga atatccaaaa cgctatgctt tcactgaata gaggatactc accgagaatt
541 gggaaaccaa tcccccaacc agtgaatccg tactcatttc taaaatacta catgttcaat
601 tctgctaaaa tgagctttct gagaggggct acccccaaat tagctgaaaa attaccaatg
661 ggtacaagat atgctagatt tgaagggtct cctgacctag acgagggtcc cgaaattcca
721 tcgcaggaat taactccagg ggacactcta ccggtgtgct atgtaagtac tgagactgat
781 tgggggaatg gtggggggga aaccgtaatc aaaacaagta tcatcgaaaa attatgcatg
841 gaggcattga gattatgcag ggaaaatcat atttttacca tgaaaacatt taaactaaaa
901 ttcccagaca aattcatgca attcagctca cgaaatcagg ggttagtgaa attggacgaa
961 acaataaacc tatattgtga gaccattatc cacgatcaca acgcgtggga aatagctaag
1021 tcaatacatg gagatattga cacaagtgat ctagatgata acttagccat ccggttatgc
1081 agtttccagg gatatagtcc aaagtacgtt gccagactga tattgtgctg gttgtccgga
1141 caagcgggaa agaaaaatgc tttatatttt cacggaccag ccaatactgg taaaacaatg
1201 atggcagaaa gcatatgcaa aatggtgcaa atatacggca atgtaaatca caataacaaa
1261 aacttcccat tcaacgactg ccacaacaaa gcggtacttt ggtgggaaga atgtagcatg
1321 acagacgaac atgtagaatc cgctaaatgt atcatggggg gatcctcagt gagaatagat
1381 aaaaaaaacc aagattcagt cctgttatgc aaaactccaa tcgtcattac ttccaataac
1441 gatatcactc aagtttccag caggaatgcc atctcaacag ttcatgcagc tgcaatcaga
1501 gcaagatgct taaaatttac attcaacaat tggctaacat caaattgggg tctgataacc
1561 gttgaacaaa tgtaccaatt tttatgctgg ggagaattag agggcattcc aaacgtggat
1621 agtctcctaa aagatcatcc cgaatttaac gggactttgc cttataacca acccaaaggt
1681 aaattttgtg ccgattgtgt taaccagttc agcactgcaa ctaacctgac cgtgtgccca
1741 gcctgctccg ggtggacaag aaagcccttc tccgaagaag aggaaccccc ctatactggt
1801 tctgaatccg ggctctttga aaaagccaac gaaggtaaga atgaggtccc agggatttat
1861 cccgtaaata gtggatccag gttaatccct gaggccccaa tcttacagaa accatcgacc
1921 tgttgggaga cggagatcct cagcgagtcg agtggatttc cagacgagcc agacttcacc
1981 gcaagcgcaa agcttctcct gaaagtggac gatctccatc tagaaagcga tctgacggtg
2041 gagcaggatc ctctggagtg caaaaagtgc tgtctggttc aataggccaa ctcgaaggta
2101 aaagcataac atttactgat gatctacctt cccttagtga gttattttgc gacgaaacac
2161 tgcccccatc cccgacatcc ccaatcaatc tccctgaacc ctctcgtgtg gtacaatggg
2221 gggacttcaa agctcaatgg gtggaaggat acattggaaa gtggagggtt gctttttcta
2281 atttcatgtg ttggtatagg aataatattg cacaaattga aacggtagaa ggtgatccat
2341 gtacaaatgc taacgttttt catgagttat atctccctat caagcaacac gccatggacg
2401 cacgcatgtt gaaaatgaaa attgaagaca aaatactgaa aggcgacttc tcacacgatg
2461 tacacttaga catgacatta acacaatgca ttcaaacaac acttagtgac aacccagcag
2521 gaatttggcc atgtgtagac aggttagcta attactgcaa tgttatattg gcttctatag
2581 gcacacaatg aaatacaaag ctccgaaagg ctacgtccct tcactaccca ctactgacga
2641 agaagcatat catcatacta gatggtggct ggatcacgtt gaaaattatg gaaaaaataa
2701 atctattggt agaggtaaag gaaaagctag gaaagagctc acaccacaac aaaaagctga
2761 acgcaaacgc ttttttatca cgcaggcaca aaaaaataaa aaaccaaatt acggcatccc
2821 atcttcatcg caacacaaag aatttttcaa aaatcatcag ggggcacaag ggggaaaagc
2881 aaagcaaaaa accaaacatt tagaaagtca agcaccacaa agacaagagg acccagagga
2941 agggcctgca cctaagcaac ctagagtaga agagcaccca tttaatcaag aagaattaga
3001 agaaatgatg gctgatgaga atgaacccga tcaatctggg atcccaatgg aaatgagcga
3061 tgggccggga accgtagggg gtggtggtgg tgggggaatc gggcattcaa cgggtaattg
3121 gaattgtgat actatatggt ctggaaatac atgtacaacc tatgcaagcc gtcattgtgt
3181 atgtcttatg cgtgacttag atcaatacaa agcaattggc aacactaacg gtcaacacgg
3241 gttaaattca gaaaatcaaa cccagtactt cgggttctcc acaccgtgga attacattga
3301 ttttaatcag tacagcgtgc actttagtcc acgcgattgg caacatttag ttaacaatta
3361 ttcgagatgg cgcccacgcg ccgtacacgt gaaaatcttt aacctgcaag tcatccagaa
3421 aactgtaaca gatagcggta cccagtactc taacgacttg acagggacaa tccaaatatt
3481 tgcagaccaa gaaggcaaat atccacggct attataccct aaccaaacaa ccctaatggg
3541 tccatttcca tccaatatat actatctgcc tcaatacgca tacatgacaa gcatgtataa
3601 ttctggtggc gccactccga cgtcatggtg gggattcccg acacgcgaaa gcgcatttta
3661 ttgcttagac gagagcccat cgcaaatgtt aaggaccggt aacgagtggg aaactacatt
3721 tgttttccca ccgagtacac aatggtgtaa taataggata tctaccgtgt ccattacaca
3781 gagacagaac ccattatatg acacctggaa tgtaaatgga agaggcgatg acgcccagag
3841 aggcaatttc tgtacctgga gaagtccatg gtatccaggg ccttacattt acttaactga
3901 tacgacagca gctacacaaa cattagaaaa cctcgctaat gtagctgttg gtccagacgg
3961 tatgcctctg gcgccaggga tgccacaata tagacccgaa actgataagg acgagtactt
4021 acatacattt tggataccca agaaaatcgg aatgaatgag ggtgacgtgc gtaactcgca
4081 aatccaagca tctactgcaa acaaagtaca agtagacacg tcatcattgt ataatacttg
4141 tcctagatca ggatacaatt ctaccgtctc acaaggagga gcccctgcgc ccatcgtttg
4201 gtcaggatgt gtaccaggca tgatatggga caataggcca gccacttatt ttgatccaat
4261 atggcaacaa ttcccagaga ccgacgaaca atttaaaatt gtctctcaat taggaggcat
4321 acccgtgaaa caatctccag ggcacatttt cgttaaagtc acgcctaagc caacaggggc
4381 tgcaaacggt tacattgatg aatattgtac ctttacttgc actgtcgaaa tcgattggga
4441 gttagaacca atcaatactc accggtggaa catgagaagt atgatttcgt acgagaccac
4501 cgatgccaaa gctgggagac aaattgtcga tgaaaatggt caataccagc ttaatatcaa
4561 ttctgctgac attacgcgtc tgtattcgac taagcgcgcg ccgcggacca actaa
//
