KEGG   Gemmata sp. SH-PL17: VT84_35220
Entry
VT84_35220        CDS       T04358                                 
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
  KO
K11907  type VI secretion system protein VasG
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ges00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VT84_35220 (clpB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ges02044]
    VT84_35220 (clpB)
Secretion system [BR:ges02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VT84_35220 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 Sigma54_activat Clp_N nSTAND3 AAA_14 ATPase_2 Zeta_toxin AAA_7 AAA_25 TniB ResIII NACHT AAA_18 TIP49 AAA_30 AAA_29 SLFN-g3_helicase TsaE AAA_28 T2SSE Rad17 DUF815 SRP54 AAA_24 AAA_6 SpoVAD
Other DBs
NCBI-ProteinID: AMV29699
UniProt: A0A142XRN9
Position
8199653..8202307
AA seq 884 aa
MAVSPRALIEKLDPTCRTTLVDEAIRLCMTRTHFYVELEHWLAALLANPNNDVGFLLRQY
AIDANKVKRDLDAALNRLKTGNTSAPGLSTNILNAVREAWVFGSLELGAPLVRSAHLLYA
MLADDNMGEQLKRASAEFGRISKEKLASDIRDLLPGMQSEEAAQEASATAVAAATGGGMT
SGGGAPRAGGKTPALDQFTVNLTAKAKAGMDPVIGRDSEIRQVIDILTRRRQNNPILTGE
AGVGKTAVVEGLAQRIAADDVPEPLRNVQLHTLDLGLLQAGAGVKGEFENRLKSVIDEVK
RSPMPIILFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTFAEYKKYFETDA
ALKRRFQQVKVDEPDEQKAIRMLRGLVPMLEKHHKVRILDEAIVDAVRLSTRYMPDRQLP
DKAVSLIDTVCARVALSQSATPPALDDTNRELQHLKTEIDFLEREGRVSTGNPERVADLT
SRKEVAESRKAALEEQLKKEKELVTQIRDKRAAIEKTGADAPEAEKLALAELNSTLTKVQ
GENPLVYPVVHGGAVAQVVSGLTGIPMGKMVLDAVQTVLKLADKLEERVVGQKHALEAIA
QRIRTARADLADPRRPQGVFLLAGPSGVGKTETAMALADLLYGGDRNMVIVNMSEYKESH
KVSRLVGTSKGYVGYGEGGVLTNAVKNRPYSVVLLDEVEKAHESVQEIFYQVFDKGVLQN
DDGEDVNFKNTIILLTSNAGTDTIMKACADPDTAPSPEGLAEMLKPDLLKAFKPALLGRM
TVVPYYPLGDSVLKKIIELKLKQIGDRLKTNYKAAFNCTPAVVDTIAARCKDVDSGARNA
DHIITGTVLTMISAEVLTRVAEGKQVTKVTVDVDTKSQFVVTVE
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggccgtttccccccgcgcgctgatcgagaaactggacccgacgtgccgcaccacgctc
gtggacgaggccattcgcctgtgcatgacgcgcacgcacttctacgtcgaactggagcac
tggctcgccgcgctcctggcgaacccgaacaacgacgtggggttcctgctccgccagtac
gcgatcgacgccaacaaggtgaaacgcgatctcgacgcggccctgaaccggctcaaaacg
ggcaacaccagcgcgccggggttgtccaccaacatcctcaacgccgtccgcgaagcctgg
gtgttcggctcgctcgaactcggcgccccgctggtccgctcggcccacctgctgtacgca
atgctcgccgacgacaacatgggcgagcaactgaagcgcgcgtcggcggaatttgggcgc
atctcgaaggagaagctcgcttccgatattcgcgatttgctgcccggcatgcagagtgaa
gaagccgcccaggaagccagcgcgacggcggtcgccgcggcaaccggtggggggatgact
agtggaggaggagcgccgcgtgcgggggggaaaacacccgcgctcgatcagttcactgtg
aacctcaccgcgaaggccaaggccggcatggacccggtgatcgggcgcgactctgagatc
cggcaagtgatcgacattctcacgcggcgccggcaaaacaacccgatccttacgggtgag
gccggtgtcggtaagacggccgtcgttgagggcctggcccagcggatcgcggcggacgac
gtgcccgagccgcttcgcaacgtacaactccacacgctcgatcttggcttgcttcaagcc
ggggccggggtcaaaggcgagttcgagaaccggctgaagtcggtcatcgacgaggtgaag
cgctcaccgatgccgatcatcctgttcattgacgaggcccacacgctcatcggtgccggc
gggcaggccgggcagaacgacgcggccaacctgctcaagccggccctcgcacgcggcgag
ctgcgcaccatcgcggccaccacgttcgccgagtacaagaagtatttcgagacggacgcc
gcgctcaagcgccggttccaacaggtgaaggtggatgagcccgacgagcagaaggcgatc
cggatgctccgcgggctggtgccgatgctcgaaaaacaccacaaggtccgcattctcgat
gaggctatcgtcgacgccgtgcggctctcgacgcggtacatgccggaccgccagctcccc
gataaggcggtgagcctcatcgatacggtgtgcgcccgcgtcgcgctgagccagtccgca
actccgcccgcactcgatgacaccaaccgcgaacttcagcacctcaagacggaaatcgac
ttcctcgaacgcgagggccgcgtatcgaccgggaacccggagcgcgtcgcggacctcacg
agccgcaaggaagtagccgagagccgaaaggccgcgctcgaagaacaactcaaaaaggaa
aaggaactcgttacgcagatccgcgacaagcgcgcagcgatcgagaagaccggggccgat
gcgcccgaagcagaaaagctcgccctcgccgaactcaactcgactctcacgaaggtgcag
ggcgaaaacccgcttgtgtaccccgtggttcacggcggcgcggtggcccaagtcgtctcc
gggctgaccggcatcccgatgggcaaaatggtcctcgacgcggtgcagaccgttctcaaa
ctggcggacaagctcgaagaacgtgtcgtcggtcagaagcacgcgctcgaagcgatcgcg
cagcgcattcgcaccgcccgcgcggacctcgcggacccgcggcgcccgcagggggtgttc
ctgctcgccgggccgagcggcgtcggcaaaaccgaaacggcgatggccctcgccgacctg
ctctacggcggcgaccggaacatggtcatcgtgaacatgagcgagtacaaggagtcgcac
aaggtctcgcgcctggtcggtacgtccaagggttacgtcggttacggcgagggcggcgtc
ctcacgaacgcggtcaagaaccggccgtacagcgtggtgctcctcgacgaagtggagaag
gcccacgagagcgtgcaggagatcttctaccaggtgttcgacaagggcgtgctccagaac
gacgacggcgaggacgtgaacttcaagaacaccatcatcctgctcacgtccaacgccggt
accgacacgatcatgaaggcgtgcgccgaccccgataccgcgccttcgcccgaaggtctc
gccgagatgctgaagcccgatctcttgaaggcgttcaagccggcgctgctcggtcgcatg
acggtcgtgccgtactacccgctcggcgattcggtgctgaagaagatcatcgaactgaag
ctgaagcagatcggggaccgcctcaaaacgaactacaaggccgcgttcaactgcacgccg
gcggtggtggacacgatcgcggcgcgctgcaaggacgtggatagcggcgcccgcaacgcg
gaccacatcattaccggcaccgtgctcacgatgatctcggcagaggtgctcacccgcgtc
gctgaaggcaagcaggtgacgaaggtgaccgtggacgtggacaccaagtcgcagttcgtg
gtcaccgtggagtga

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