KEGG   Geosporobacter ferrireducens: Gferi_10810
Entry
Gferi_10810       CDS       T04493                                 
Name
(GenBank) AAA family ATPase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gfe  Geosporobacter ferrireducens
Pathway
gfe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Gferi_10810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfe03400]
    Gferi_10810
Enzymes [BR:gfe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Gferi_10810
DNA repair and recombination proteins [BR:gfe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Gferi_10810
SSDB
Motif
Pfam: AAA_19 HHH_4 AAA_30 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 PIF1 HHH AAA_22 nSTAND3 HHH_2 PhoH UvrD-helicase SLFN-g3_helicase Helicase_RecD AAA AAA_28 UvrD_C T2SSE NTPase_1 RsgA_GTPase AAA_12 AAA_24 cobW DEAD AAA_17 AAA_7 Zeta_toxin ABC_tran TrwB_AAD_bind 5_3_exonuc AAA_29
Other DBs
NCBI-ProteinID: AOT70035
UniProt: A0A1D8GGJ2
Position
complement(2282879..2285104)
AA seq 741 aa
MTIEIQGVLTDIVFYNEANGYIVAVVDTTDEDITVVGYMPIVNKGETIAFSGKWIVHPVY
GKQLEILSYRQVAPNTLEGIENYLASGLIKGIGPKTAKKIVDEFGKDALDIIQYRPHLLT
QIEGIGAAKANLIAEAFQEQRELQEVMLFLQQYGVTPNYAVKIYKKYGQETIRLIQENPY
RLADDIIGIGFRIADTIAKRMGIDPRSAYRLMCGLKYMLMQSNLEGHTYTPREELLRETA
RLLEVEMALLEEPLMNLALNNEIQLENLEGEIVVFGLAYFFAETYVCKKLIELAKTEIPP
IGENIDALITKMENEEGITLADNQKHAIKEAAQNGVSVITGGPGTGKTTTINSIIRMFEM
NNLSIVLGAPTGRAAKRMSEATGREAKTIHRLLEYAYAEDDLGMAFGRDEDEPLAADVVI
IDEMSMVDILLMKALLRAILPGTRLILVGDVDQLPSVGPGNVLRDIIESNIFKVVKLDKI
FRQAQESMIIVNAHRINKGEYPYTNQKEKDFYFISKKKQESIAETIQALCKERLPKFNGF
DPIKDIQVLTPMKKGVVGMLQLNNQLQAILNPKGPYKEEKEMKEKLFRVGDKVMQIKNNY
NLKWKKTEDEGEGEGVFNGDMGYIQGIDAEDREMWVLFDDEKLVKYDFSQLDELELAYCI
TIHKSQGSEFPVVVMPVSWGPPMLQTRNLLYTAVTRAKKLVVMVGQEGCLKNMVDNHRIT
KRNTGLGIRLRRFLEDRLIEF
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgaccatagaaattcaaggagtcttgaccgatattgtcttttataatgaggctaacgga
tatattgtcgctgtagtagatacaacggatgaagatattacagtggtaggatacatgccg
attgtcaataaaggagaaaccattgcttttagcggaaaatggattgttcatccagtctat
ggaaagcagttggagatccttagctacaggcaggtggcacctaacaccctagaagggata
gagaactatctggcttctggcttgatcaagggaataggccctaaaactgctaagaagatt
gtggacgagtttggtaaagatgcactggatattattcaatacagacctcatttgctgacg
cagattgaaggaatcggagcggcaaaggccaatttgattgcagaggcttttcaggagcag
cgggaactgcaggaggtaatgctttttttgcagcaatatggtgtaacgccaaactatgca
gtaaaaatatacaaaaaatatggtcaagaaaccatccgactgatacaagaaaatccttac
cgattggctgacgatattatcggaattggatttagaatcgcagatactatcgcgaaaaga
atgggcattgatccccgttcagcctatcggcttatgtgcggattaaaatatatgctgatg
cagagcaatctagagggccatacctatacgccccgggaagaacttctaagagaaactgca
aggctcttggaggtagagatggctttgctggaagaacctcttatgaatttggctctcaat
aatgagattcaattagaaaatctagagggtgagattgtcgtgtttggactggcatacttt
tttgcagaaacctatgtctgcaaaaagctcatagagttagcaaaaacagaaattcctccc
attggagaaaatatcgacgcacttatcacaaaaatggagaatgaagaagggataacactg
gcagacaatcaaaaacacgcaatcaaagaagctgcacaaaacggggtgtccgtgattact
ggaggtccgggaacgggaaaaacaactacgattaatagtattattcggatgtttgaaatg
aataacctcagcattgtgttaggagcacctacgggccgtgctgccaaaagaatgagtgag
gcgactggaagagaagctaaaaccattcatcgccttctggagtatgcctatgcagaggat
gatttggggatggcttttggaagagatgaggatgagccgctggcggcagatgtagtaatt
attgatgagatgtctatggtggatattttgctgatgaaggcactgctgcgtgccatactg
ccgggtacacgattgatattggttggagatgtggatcagctgccctccgtaggacctgga
aatgtactgcgggatattattgaaagcaatatatttaaagtcgttaagctagataaaatt
ttccgtcaggcccaggaaagcatgatcattgtaaatgcccatcgaatcaataaaggagaa
tatccttataccaatcaaaaagagaaggacttttatttcatatcaaagaaaaagcaagag
agtattgcagaaactatacaggcattgtgtaaggagcgtctgcctaaatttaacggattt
gatcccattaaagatatccaggttctcacgcctatgaaaaaaggcgtggtaggaatgctg
cagctgaacaaccaacttcaggcaattttaaatccaaaaggcccatataaggaagaaaag
gaaatgaaggaaaagctcttccgtgtaggggacaaagtaatgcaaatcaaaaataattac
aatctgaaatggaaaaaaacagaggatgaaggagagggagaaggcgtcttcaatggagat
atgggatatattcagggcattgatgccgaggatagggaaatgtgggtactctttgatgat
gaaaagctggtaaagtatgattttagtcaattggacgagctggagctggcttactgcatc
acgattcacaaaagccaaggtagcgagtttccagtagtggtaatgccggtgagttggggg
cctcctatgctgcagacgaggaatctgctctatactgctgtaacgcgagctaaaaaattg
gtagttatggtaggacaagagggctgtctaaaaaacatggtggataatcaccggatcacg
aagcgtaataccggtttaggaattcgcttgagaagatttttagaagatagattgatcgaa
ttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (34)   
   Pfam (34)   
All databases (84)   

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