KEGG   Geosporobacter ferrireducens: Gferi_12315
Entry
Gferi_12315       CDS       T04493                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
gfe  Geosporobacter ferrireducens
Pathway
gfe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Gferi_12315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfe03400]
    Gferi_12315
DNA repair and recombination proteins [BR:gfe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Gferi_12315
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Gferi_12315
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_C RecR_ZnF HHH HHH_5 IMS_HHH HHH_8
Other DBs
NCBI-ProteinID: AOT70307
UniProt: A0A1D8GHD1
Position
complement(2626707..2627306)
AA seq 199 aa
MNYYAAPVARLIEEFSKLPGIGRKSAQRLAFYVLNMREEDAVNLSEAIVEAKQRTKYCSY
CGNITDIDPCNLCRSEQRDRSMICVVEDPRDVVAMERTREFKGVYHVLHGAISPMEGIGP
EDIRIKELLLRLQNVSVKEVILATNPTIEGEATSMYISKLIKPMGIKTTRIAHGIPVGGD
LEYADEVTLSKALEGRREI
NT seq 600 nt   +upstreamnt  +downstreamnt
atgaattattatgcggcgccagtggctagactgattgaagagttttcaaaacttcccggg
ataggaagaaaatctgctcagagacttgccttttatgtgctaaatatgagagaagaagac
gctgtaaatctatctgaagccattgtagaagctaagcaaagaacgaaatactgctcttat
tgtgggaacatcacagatatagatccatgcaacctctgtagaagtgaacagcgggataga
agtatgatctgtgtggtggaggaccctcgcgatgtggtagccatggagagaacaagagaa
ttcaaaggcgtatatcatgtgctccatggagccatttctcctatggaaggcattggaccg
gaggatatacgcattaaggaactgctccttcgactacaaaatgtatcagtcaaggaagtg
atcctagcaacgaatccaaccattgaaggagaagccacttctatgtatatttctaagcta
atcaagcctatgggaatcaaaaccacaagaattgcccatggaataccggtaggcggagac
ttggaatatgcagatgaggtgaccttgtctaaggctttagagggaagaagagagatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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