KEGG   Geosporobacter ferrireducens: Gferi_12325
Entry
Gferi_12325       CDS       T04493                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
gfe  Geosporobacter ferrireducens
Pathway
gfe03030  DNA replication
gfe03430  Mismatch repair
gfe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Gferi_12325
   03430 Mismatch repair
    Gferi_12325
   03440 Homologous recombination
    Gferi_12325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gfe03032]
    Gferi_12325
   03400 DNA repair and recombination proteins [BR:gfe03400]
    Gferi_12325
Enzymes [BR:gfe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Gferi_12325
DNA replication proteins [BR:gfe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Gferi_12325
DNA repair and recombination proteins [BR:gfe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Gferi_12325
SSDB
Motif
Pfam: DNA_pol3_delta2 DnaX_C DNA_pol3_gamma3 AAA AAA_22 RuvB_N DNA_pol3_delta_C TIP49 AAA_5 ResIII AAA_30 AAA_19 AAA_2 BBIP10 AAA_24 AAA_7 DUF815 RNA_helicase AAA_18 AAA_assoc_2 Rad17 Mg_chelatase AAA_16
Other DBs
NCBI-ProteinID: AOT70309
UniProt: A0A1D8GHF2
Position
complement(2627827..2629473)
AA seq 548 aa
MTYIALYRKWRPRTFEDVIGQEHITQTLKNQIKNNNIAHAYLFCGTRGTGKTSTAKIFAR
AVNCANPVDLNPCNQCDTCTGIQQETVMDVIEIDAASNNGVDDIRELRENVKYPPTKGKY
KVYIIDEVHMLSTGAFNALLKTLEEPPHFVIFILATTEPHKIPATILSRCQRFDFKRVKE
EEMVKLLADICEKTGIQAESSALRLITRNADGAMRDALSLLDQCIAYCVDGITYDDVIGV
LGTVSDEFIFSLVNAVIEGNSREAMENIEALIGAGKDIQQFIKDLIRHYRNLLMTKASQN
VEGIINLSRENIERLKEQGEKTDTSAAIRAIHILSEVEVNAKWSSQPRILLEVAVLKLCQ
PMLDPSIDGLLERIAALEKKLQHGFVRSEVEKRAEEEEKPIEISTKKVEEKQPQPMPRPP
ASGKSISLEKIEKLWSDILKEIKKRKISAHAVLMEGKPATVDRNTLLIVFKEGFGFHKEA
AGNSPNKEFIEGVLEEILGETVYIKCIMEDEAPQLSEAGKEISIAEEDLEVQKIIEIFGE
DLVEIIEE
NT seq 1647 nt   +upstreamnt  +downstreamnt
ttgacatatattgccctatatcgaaagtggcgtcccagaacatttgaggatgtgatcggt
caggagcacattacacaaactttaaaaaatcagattaaaaataataatattgcccatgcc
tacttattttgcggtacccgtgggactggaaaaacctcaaccgccaagatttttgcacgg
gctgtaaattgtgccaatccggttgacctgaatccctgcaaccaatgtgatacttgcacg
ggtatccaacaggaaacggtcatggatgttattgaaatcgatgcagcttcgaataatggt
gttgatgatattcgagagctgagagagaatgtaaaataccctccgacaaaaggtaaatat
aaagtatatatcattgatgaagtgcacatgctctctacaggagcgttcaatgctctgctg
aaaaccctggaagagccgccccattttgtaatttttatcttggctaccacagaacctcat
aagattcctgccaccattttgtccagatgtcagcgctttgattttaaaagggtaaaagaa
gaagaaatggtgaaattgttggccgatatctgtgagaaaacaggtattcaagcggaatca
agcgcccttcgtctaattacaagaaatgcagacggcgcgatgcgggatgctttaagtttg
ttggatcaatgtattgcctactgtgtagacgggattacatatgatgatgtaattggtgta
ttagggactgtaagcgacgaatttatattcagccttgtcaatgcagtgatagagggaaac
tcaagagaggcgatggagaacatcgaggcgcttattggtgcggggaaagacatccagcag
tttattaaggacttgatcaggcactatagaaacctgctgatgacaaaggcttctcaaaat
gtagaaggaattatcaatctttctagagaaaatattgaaagattaaaggaacaaggagaa
aagacggatacctctgcggctattcgtgctattcatattctgtctgaggtggaggtaaat
gccaagtggtccagccaaccaagaatattactggaggtagcagtgttgaagctatgtcaa
ccaatgttagatccttcgatagacgggctgttggagcggattgcagcattagagaagaaa
ctgcagcatggatttgtaagaagtgaggtagaaaaaagagcagaggaagaagaaaaaccg
attgaaatatcaacaaaaaaagtagaagaaaaacaaccacaaccgatgccaagaccgccg
gcttcagggaaatccatttctttagagaagattgaaaagctttggtcggatatccttaaa
gagattaagaaaagaaagatctcagcccatgcagtactgatggaaggaaagccggctact
gtagataggaacacactgctgattgtttttaaagaaggctttggttttcataaggaagct
gccggaaacagtccgaataaggaatttattgaaggggtccttgaagaaattctgggagaa
acagtctatatcaaatgtattatggaggatgaagcgccccagctatctgaagccggcaaa
gaaatttctatagctgaagaggatttggaagtacaaaagatcattgagatctttggagaa
gacctggttgaaatcatagaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (105)   

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