KEGG   Geospiza fortis (medium ground-finch): 102032089
Entry
102032089         CDS       T03755                                 
Symbol
VDR
Name
(RefSeq) vitamin D3 receptor
  KO
K08539  vitamin D3 receptor
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gfr01009]
    102032089 (VDR)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gfr03000]
    102032089 (VDR)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:gfr03310]
    102032089 (VDR)
Protein phosphatases and associated proteins [BR:gfr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102032089 (VDR)
Transcription factors [BR:gfr03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    102032089 (VDR)
Nuclear receptors [BR:gfr03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   102032089 (VDR)
SSDB
Motif
Pfam: UPF0160 zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 102032089
NCBI-ProteinID: XP_014166788
Position
Un
AA seq 614 aa
MDAACSTSVADAAAECERSVPRVCGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTC
PFSGECHITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKREMILKRKEEEALRESL
KPKLSEEQQKVIDILLEAHRKTYDPTYADFTKFRPPVRSHPSSRGATKSSSLLTQDLSSE
DSSDLFSSEAFSTFPDPAEPPPFPSLALQEEQDESSSVNLEFSQLSMLPHLADLVSYSIQ
KVIGFAKMIPGFRDLSVEDQIVLLKCSAMEVIMLRSNESFTLEDMSWTCGSNDFKYRVSD
VTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPGSPARANKLLLGQINSAL
GFCVRPSIPVSLAIPGTLYENFVEEIDAMDNGIAPAAGEPRYALSTTLSARVGHLNPRWN
DPDQDTEAGFRRAMELVGTEFLQRLDFYHQAWLPARALVEEAVRRRLEVDSSGQVLELSQ
GGCPWKEHLFQLEQELALPRPLLLVLFPDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLR
DEALSELAGIPGCVFVHASGFIGGNRTREGALEMARRPSPVPKTGLFDPKRAALAHGLQW
DHTNSFCESTPSSS
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggacgccgcctgcagcacctcggtggccgatgccgccgcggagtgcgagcgcagcgtg
cccagggtctgcggggtctgcggggacagagccaccggcttccacttcaacgccatgacc
tgcgagggctgcaagggcttcttcaggaggagcatgaagaggaaggccatgttcacctgt
cccttcagcggggagtgccacatcaccaaggacaaccggcggcactgccaggcctgccgg
ctgaaacgctgcctggacatcggcatgatgaaggagttcatccttactgacgaggaggtg
cagaggaagagggagatgatcctgaagaggaaggaggaggaagccctgagggaaagcctc
aaacccaaactctcagaggagcagcagaaagtcatcgacatcctgctcgaggcccatcgc
aaaacctatgaccccacctacgctgacttcaccaaattccggccccctgtgaggagccac
cccagcagcagaggggccacaaaatcctcgtccctgctcacccaggacctgtcctcggag
gattcctcggatctcttcagctccgaggccttcagcacattcccagaccccgcggagccg
ccgccgttccccagcctggcgctgcaggaggagcaggacgagagctcctcggtcaacctg
gagttctcccagctctccatgctcccacacctggctgacctggtcagctacagcatccag
aaggtgatcggctttgccaagatgatcccgggattcagggatctgtctgtggaggaccag
atcgtgctgctcaagtgcagcgccatggaggtgatcatgctgcgctccaacgagtccttc
accctcgaggacatgtcctggacctgcggcagcaatgacttcaagtacagggtcagcgac
gtcacgcaagccgggcacagcatggacctgctggagccactggtgaagttccaggtgggg
ctgaagaagctgaacctgcatgaggaggagcacgtgctgctcatggccatctgcatcctg
tccccagggtccccggctcgggccaataaactcctgcttgggcaaatcaactcagccctg
ggcttttgtgtccgtccatccatcccggtgtctctggccatcccgggcaccctgtacgag
aactttgtggaggagatcgatgccatggacaacgggatcgcgccggcggcgggggagccg
cgctacgccctgagcaccaccctgagcgcccgcgtggggcacctgaacccccgctggaac
gaccccgaccaggacaccgaggcagggttccggagggccatggagctggtgggcaccgag
ttcctgcagcgcctggatttctaccaccaggcctggctgccggcgcgggcgctggtggaa
gaggccgtgcggcgccgcctcgaggtggacagcagcgggcaggtcctggagctgtcccag
ggtggctgtccctggaaggagcacctgttccagctggagcaggagctggccctgcctcgg
ccactgctgcttgtgctgttcccggaccggggcgggcagtggcgggtgcagagcgtcccc
acagccccccacagcttccagagccggctccccctgcccgaggcctggcgggggctccgg
gatgaggcgctgtccgagctggccggaatccccggctgcgtcttcgtccacgccagcggc
ttcatcgggggcaaccggacccgggagggggccctggagatggcccggaggccatcacct
gtccccaaaacggggctctttgatcccaaaagagcagccctggcccatgggctgcagtgg
gatcacaccaacagcttctgtgagtccactccaagctcttcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system