KEGG   Geospiza fortis (medium ground-finch): 102032946
Entry
102032946         CDS       T03755                                 
Symbol
TNNC1
Name
(RefSeq) troponin C1, slow skeletal and cardiac type
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04020  Calcium signaling pathway
gfr04260  Cardiac muscle contraction
gfr04261  Adrenergic signaling in cardiomyocytes
gfr04814  Motor proteins
gfr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    102032946 (TNNC1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    102032946 (TNNC1)
   04820 Cytoskeleton in muscle cells
    102032946 (TNNC1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    102032946 (TNNC1)
   04261 Adrenergic signaling in cardiomyocytes
    102032946 (TNNC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gfr04812]
    102032946 (TNNC1)
Cytoskeleton proteins [BR:gfr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     102032946 (TNNC1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EF-hand_4 SPARC_Ca_bdg DUF5580_M DUF6694 EMG1
Other DBs
NCBI-GeneID: 102032946
NCBI-ProteinID: XP_005422483
UniProt: A0A6I9HID1
Position
Un
AA seq 161 aa
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIM
LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgacatctacaaggcagcggttgagcagctgacagaagagcaaaaaaatgagttc
aaggctgcctttgacatcttcgtgctgggggcagaggatggctgcatcagcaccaaggag
ctggggaaggtgatgaggatgctggggcagaaccccacccctgaggagctgcaggagatg
atagatgaggtggatgaagatggcagcggcaccgtggacttcgatgagttcctggttatg
atggtgcggtgtatgaaagatgacagcaaaggaaaaaccgaggaggaactctcagacctc
ttcaggatgtttgataaaaacgctgatggctacatcgacctcgaggagctgaagatcatg
ctgcaggcaacaggagagaccatcaccgaggatgacatagaggaactgatgaaagatggg
gataaaaacaacgatggcaggattgactatgatgagttcctggagtttatgaagggggtt
gaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (41)   

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