KEGG   Geospiza fortis (medium ground-finch): 102034937
Entry
102034937         CDS       T03755                                 
Symbol
LEF1
Name
(RefSeq) lymphoid enhancer binding factor 1
  KO
K04492  lymphoid enhancer-binding factor 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04310  Wnt signaling pathway
gfr04520  Adherens junction
gfr04916  Melanogenesis
gfr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    102034937 (LEF1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    102034937 (LEF1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    102034937 (LEF1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102034937 (LEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gfr03000]
    102034937 (LEF1)
Transcription factors [BR:gfr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    102034937 (LEF1)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 102034937
NCBI-ProteinID: XP_014167397
Position
Un
AA seq 366 aa
MRPTQKKMKLKVKWPAATQTDLALHQKCSKILPSFNGGQVSRQTQAQDSYHDKGREHPEE
GKHPDNGLYSKGPSYSGYSGYIMMPNMNNDPYMPNGSLSPPIPRTSNKVPVVQPSHAVHP
LTPLITYSDEHFSPGSHPSHVPSDVSSKQGMSRHPPAPDLPTFYPLSPGGVGQITPPLGW
QGQPVYPISSGFRQPYPSSLSVDPSMSRFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHL
HNDSELMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQIL
GRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGTGPR
MTAAYI
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgagacccactcaaaagaaaatgaagctgaaggtgaaatggccagctgcaactcagacc
gaccttgctcttcatcaaaagtgctctaaaatcctcccttccttcaatggtggtcaggtt
tccaggcagactcaagcacaggattcctaccatgataaaggcagagaacaccccgaggaa
ggaaagcatccagacaatggcttatacagcaagggaccatcgtactctggttattctggg
tatatcatgatgccaaatatgaataacgacccatacatgcctaatggatctctgtcgcca
cccatccccagaacatccaacaaggtgcccgtggtacagccttctcatgctgttcacccc
ctcacccctcttatcacctacagcgatgagcacttttccccggggtcacacccatctcac
gtcccctctgacgtcagctccaaacaaggcatgtccaggcatcctccagctcctgatctc
cctaccttctatcccttgtctccagggggggttggacagataacaccacctcttggctgg
caaggtcagcctgtatatcccatctcgagtggattcaggcagccctatccatcctcactt
tcagtcgacccttccatgtccaggttttcacatcacatgattcctggtcctccaggccct
cacacaactggaatccctcacccagctattgtaacacctcaagtaaaacaagaacatctg
cacaacgacagtgagctaatgcatgtgaagcctcagcacgaacagagaaaagaacaagag
ccaaaaagacctcatattaagaaacctctgaatgctttcatgttgtacatgaaagaaatg
agagcaaacgttgtagcagagtgtactctgaaagaaagtgcagctatcaaccagatcctt
ggcagaaggtggcatgctctctcccgtgaagaacaagcaaaatattatgaactagctcgt
aaagaaaggcagctacacatgcagctttatccaggctggtctgcaagagacaactatggg
aagaaaaagaagaggaagagagaaaagttgcaggaatcagcatcaggtacaggccccaga
atgacagctgcctacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system