KEGG   Geospiza fortis (medium ground-finch): 102035055
Entry
102035055         CDS       T03755                                 
Symbol
TAF2
Name
(RefSeq) TATA-box binding protein associated factor 2
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102035055 (TAF2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gfr01002]
    102035055 (TAF2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gfr03021]
    102035055 (TAF2)
   03036 Chromosome and associated proteins [BR:gfr03036]
    102035055 (TAF2)
Peptidases and inhibitors [BR:gfr01002]
 Metallo peptidases
  Family M1
   102035055 (TAF2)
Transcription machinery [BR:gfr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102035055 (TAF2)
   Coactivators
    SAGA/TFTC/STAGA complex
     102035055 (TAF2)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     102035055 (TAF2)
SSDB
Motif
Pfam: HEAT_2 Peptidase_M1_N Peptidase_M1 SR-25 RNA_polI_A34
Other DBs
NCBI-GeneID: 102035055
NCBI-ProteinID: XP_014162359
UniProt: A0A6I9Z5H7
Position
Un
AA seq 1200 aa
MNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPDMEGNMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE
KFPTPASRLALTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
TCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRVLQKNGHVPSDPALFKSYAEYGHFVDVRIAALEAVVDYTKVDRSYEELQWL
LSMVQNDPVPYIRHKILDMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANNQEPVISSNNHGQS
VGFQNTEDDHLIKETASSISGHQQGVKRKADIPLGSPLEPGQILEKNEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSGEINMHPVSAAPLSVFSKESNS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDTKEKEKDPFVFSNSPASARSIRSPSLSD
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgaataggaagaaaggagacaaaggatttgaaagcccaagaccctataaattaactcat
caagtagtttgtatcaacaacataaattttcagagaaagtctgtcgtaggttatgtggaa
ctcacgatatttcccacagtggcaaacctgaacagaatcaagctgaacagtaaacagtgc
cggatttacagagtgagagtcaatgatttagaagcagctttcatctataatgatccaaca
ctggaggtctgtcaccatgagtcaaagcagaggaatctcaactatttctcgaatgcctat
gctgccgctgtcagtgctgtggacccggatgctggaaacggagagctctgcattaaggtt
ccctcagagctgtggaaacatgttgatgagttaaaagtcctgaaggtgcatataaacttt
tctctggaccagccaaaaggaggccttcattttgtggtacctgacatggagggcaacatg
gcagaaagaggggctcatgtcttttcatgtggttatcaaaattctacaagattttggttt
ccttgtgtggattcatattctgagttgtgtacctggaaacttgagtatactgtagatgct
gcaatggtggctgtttcaaatggagatttggtggaaactgtatacacccatgatatgaga
aagaagacttttcattacatgttgactattccaactgcagcttctaacatctccttggca
attggaccttttgaaatccttgttgatccatacatgcatgaggtgactcacttttgcttg
ccacaacttctcccactgctcaaacataccacatcataccttcatgaggtgtttgaattt
tatgaggagattcttacctgccgctatccttactcctgtttcaagactgttttcatagat
gaagcttatgttgaagtagctgcttatgcatccatgagtattttcagcacaaatctcttg
cacagtgcaatgattatagatgaaactccactgacaaggagatgcttggcacaggccctg
gcccagcaattctttggatgtttcatatccagaatgtcctggtcagatgaatgggtgcta
aagggaatctctggttacatttatggcctttggatgaaaaaaacctttggtgttaatgag
tatcgccactggattaaacaggagctagatcaaatcgtggcatacgaactgaagactgga
ggagttttactgcatccaatattcggaggaggaaaagagaaagacaaccctgcttcacat
ttacatttttctatcaaacaccctcatacactgtcctgggagtattacacgatgttccag
tgtaaagcacatcttgttatgagactgattgagaacagaattagcatggagtttatgtta
caggttttcaacaagttattgagtctggccagtactgcttcatctcagaagttccagtca
cacatgtggagtcagatgttggtttccacatctgggtttttgaaatctatctcaaatgtc
tcaggcaaagacatccaacctttaataaagcagtgggtggatcagagtggagtggtaaaa
ttttatggtagctttgcatttaatagaaaacggaatgtattggaattggaaataaaacaa
gattacacgtctcctgggactcagaaatatgtgggtcctcttaaagtgacagtgcaagaa
cttgatggctcattcaaccatacattgcagattgaagaaaacagtcttaaacatgatata
ccttgccattctaaaagcagaagaaataagaagaaaaagattccactgatgaatggagaa
gaggtggacatggacctttctgctatggatgcggattcccccttgctctggataagaata
gatcctgatatgtcagtactgaggaaggtggaatttgagcagtctgatttcatgtggcag
tatcagctgagatatgagagagatgtggtggcacaagaagaagccattctggccctggag
aagttccctactccggcatcccggcttgccctgactgacattctggagcaggagcagtgc
ttctaccgggtgagaatgctggcctgcttctgccttgcaaagattgcaaattccatggta
agtacgtggacaggaccaccagccatgaagtcactctttacccgaatgttttgttgtaag
acttgtccaaacattgtgaagaccaacaacttcatgaactttcagagctactttcttcaa
aagactatgcctgttgctatggcccttctgagagatgttcacaacctttgtcctaaggag
gttttaatgtttattttggatttgatcaagtataacgataacaggaagaataagttttca
gacaactactaccgtgctgaactgattgatgccctggctaactctgtgactcctgcagtc
agtgtgaacaatgaagttcgaacattggataacttaaatcctgatgtgcgacttattctt
gaggaaattacccgttttctgaatatggagaagcttcttcccagttacagacatactatc
acagtcagctgtttaaaagctattcgggtgcttcagaagaatggccatgtcccaagtgac
cctgctctcttcaagtcgtacgcagagtacgggcacttcgttgacgtccggattgcagca
ctggaggctgttgttgattatacgaaagttgataggagctatgaagaattacagtggcta
ctctctatggttcaaaatgatcctgtaccctacataaggcataagattttggatatgctg
actaagaatccacctttcaccaagaatatggagtcccccttatgtaatgaagctttggta
gatcagctttggaaactgatgaattctggaacttcacatgactggagattacgatgtggt
gctgtggacctctatttcacactctttggcctcagcagaccttcctgtttaccattacca
gagcttggacttgttcttaacctgaaagaaaagaaggctgtactcaatccaacaattatc
cctgaatcagttgcaaataatcaggagcctgtgatcagttctaacaatcatgggcagtca
gtaggatttcagaacaccgaggatgatcatcttattaaggaaacagcatccagcatttct
ggtcatcagcagggggtgaagaggaaggctgatataccgctcgggtctccattggagcca
gggcaaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattctcaaac
tctcaagaggaagaggaaattgatatggacacagttcatgacagccaagccttcatttac
catcatttgaatatgctggagagaccatccacaccaggtaaggaacaatcttcgggggag
ataaacatgcaccctgtctcagcagctccactctctgtgttcagtaaagaatccaactcc
tcaaaacatagcgaccaccatcaccatcaccaccatgagcacaagaaaaagaagaagaaa
cacaagcataagcataaacataaacataaacatgatactaaagaaaaggaaaaggatcct
tttgttttctcaaacagtccagccagtgcacgatcaatccgttccccatcactttcagac
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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