KEGG   Geospiza fortis (medium ground-finch): 102035151
Entry
102035151         CDS       T03755                                 
Symbol
TSEN2
Name
(RefSeq) tRNA splicing endonuclease subunit 2
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gfr03016]
    102035151 (TSEN2)
Enzymes [BR:gfr01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     102035151 (TSEN2)
Transfer RNA biogenesis [BR:gfr03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    102035151 (TSEN2)
SSDB
Motif
Pfam: tRNA_int_endo_N tRNA_int_endo
Other DBs
NCBI-GeneID: 102035151
NCBI-ProteinID: XP_005430471
UniProt: A0A6I9HSS5
Position
Un
AA seq 451 aa
MAEAVFHPPKRKRRVFESYKAPFPVDVGGKDFRLCQAEIINNNVIVRNPEDIEQLYNKGY
FGKGILSRSRPVFSISDPQLVAKWRGVNTNMPIITSQKYQRHVQWAQSVLQEQGLDSCSI
SRILESYTQPLGLPFCRGDGDGQTGHSCTTGSPGNAEVCRKSGREGAQSPEGQNQHSKEG
GDAALDPGSASRDQEQRDPREMAEGSCHRDPPVPWGCKGKQSPEQRAWEGMDSRECAAEY
VLVQEEEEGSSCPEDDSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCL
SIYYGEEPLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLLLYRKGPP
FYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTNANASKELMLCYLIRPSDMTAEEM
ATPECMKRIKVQELIVSRWVSSRERSEQDEF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcagaagctgttttccaccccccaaaaaggaaaagaagagttttcgagtcctacaag
gctccctttcctgtggatgtgggggggaaggatttcagactctgccaggctgagatcatt
aacaacaatgtgattgtgaggaaccccgaggatattgaacagctctacaacaagggctat
tttggcaaagggatcctctccaggagccggccagtgttcagcatttcagatcctcagctg
gtggccaagtggagaggtgttaacacaaacatgcccataattacatctcaaaagtaccag
cgccacgtgcagtgggctcagagtgtgctgcaggagcagggcctggacagctgctccatc
agcagaatcctggagagttacacccagcccctggggctgcccttctgcagaggggatggg
gatggacagactgggcacagctgcaccacagggagcccaggaaatgcagaagtgtgcagg
aaatctggcagggaaggagcccaaagccctgagggtcagaaccagcactccaaggaggga
ggagatgcagccctggatcctgggagtgcctccagggaccaggagcagagggatcccagg
gaaatggctgaagggtcctgccacagggaccctcctgtgccctggggctgcaaggggaag
cagagccctgagcagagggcttgggaggggatggactccagggaatgtgctgcagaatat
gtgctggtgcaagaggaggaagaaggcagctcctgtcctgaagatgactccactcatgca
caagagaatcttgtcaagaaggaagtattagtatgcagaaaaaacccatttaggattttt
gagtacttacaactcagcttggaagaggcttttttcttggtgtatgctctgggatgttta
agtatttattatggagaggagcccctgagcatcgtgaagctgtgggaagtgttcagtgag
gtgaagcctgatttcaaaaccacctacatggcctaccactacttcaggggcaagggctgg
gtgcccaaggtggggctgaagtatggcacggatctcttgctgtatcggaaagggcccccg
ttctaccatgccagttactctgtcattgctgagttggtggatgataattttgaaggttcc
cttcgcagacccctcagctggatgtccctgtctgggctgaacagaacaaatgcaaatgct
tccaaggagctcatgctgtgctacttgatcagaccttctgacatgactgcagaggagatg
gcaaccccagagtgcatgaagagaatcaaggtccaggagctgatcgtgtctcgttgggtt
tcctcccgtgagcgcagcgagcaggatgaattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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