KEGG   Geospiza fortis (medium ground-finch): 102036138
Entry
102036138         CDS       T03755                                 
Symbol
ARFGEF1
Name
(RefSeq) ADP ribosylation factor guanine nucleotide exchange factor 1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102036138 (ARFGEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102036138 (ARFGEF1)
Membrane trafficking [BR:gfr04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    102036138 (ARFGEF1)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS DCB Sec7-like_HDS
Other DBs
NCBI-GeneID: 102036138
NCBI-ProteinID: XP_005423090
UniProt: A0A6I9HJ29
Position
Un
AA seq 1843 aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKS
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPVSHHE
PESPQLRHIPAQADQLSKDHERELDHSTNDVDKNLQEDIEAENGSDISSAENEQTEADQA
TAAENLSKADGGTYDGESNECEEKAQEIVESIVQEMVNIVVGDVEGTAGGDGTTVSLEDG
SDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQKDAF
LVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQY
LCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDH
KWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQ
ELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQDSSETKHPETINRYGS
LNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQG
MLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMF
LEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVK
NKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQSVASE
KQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGL
QDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFTLLTVSSGITEMKQKNID
TIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSFTGTK
DQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFV
RWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNE
DVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMV
NSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSFQDAV
KCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFP
ILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQ
TEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCL
ENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPVGGEFCSGSPSDAKEKLDTI
SQKSVDIHDSIQPRSSDGRPFQPSTGATVAEEASKARPAAKFPEQKLFAALLIKCVVQLE
LIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFKLLDCL
LESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRTSA
WEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDERFKAHASFYYPL
LCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQEPGISKH
NT seq 5532 nt   +upstreamnt  +downstreamnt
atgtatgaagggaagaagacgaaaaacatgtttctgacccgggccctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggca
ctagaggaaataaaggctgaaacagaaaagcaaagtccccctcatggagaagcaaagtct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcggacaaatac
ttcctaccatttgaattggcatgccagtccaagtgccccaggattgtcagtacatctcta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtaca
gctccaggaaaaaaactaattgatagaattatcgagacaatatgtggctgttttcaaggc
cctcaaacagacgaaggggttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacacatagaaatccacgaaggaacagtactacaggctgtaagaacatgttacaat
atctacctagcaagcaaaaatcttatcaatcaaactacagccaaggccactctaacacaa
atgctgaatgtcatttttgcacgtatggaaaatcaagcacttcaggaagccaaacagatg
gaaaaggaaagacacagacagcaacaccatctccagcagtctccagtaagccatcatgag
cctgaatcacctcagttgagacatattccagcacaggctgatcagctgtccaaagaccat
gagagagagcttgaccacagcacaaacgatgtggacaagaaccttcaagaagatattgag
gcagaaaatggatctgacatttctagtgctgaaaatgaacagacagaagctgaccaagcc
acagcagcagaaaatctttctaaagctgatggaggaacttacgatggtgaaagcaatgag
tgtgaagagaaggcacaagaaattgtagaaagtattgtgcaggaaatggtgaacatagta
gttggagatgtggaagggactgcaggtggtgatggcacaactgtatcattagaggatggc
agtgacagtgaaaacattcaggcaaatggaattccagggactccaatttctgttgcttat
acaccatctttacccgatgacagattatctgtctcttccaatgatactcaggaatctgga
aattcttcaggacctacccctggtgctaagttttcccacattttacaaaaggatgccttc
cttgtattcaggtcactgtgtaaactttccatgaagcccctgtcagatggaccaccagat
ccaaaatctcatgaactgcgatcaaagattctttcattgcagttgcttctgtccattctg
caaaatgcaggaccagtcttcaggacaaatgagatgttcattaatgctataaagcagtac
ctctgtgttgcactgtcaaaaaatggagtctcatcagttccagaagtttttgaactttca
ctttccatatttcttaccctcctgtcaaactttaagactcatctaaagatgcagattgag
gttttcttcaaagaaattttcctgtatatcttggaaacttctactagctcatttgatcat
aagtggatggttatacaaactctgacaaggatatgtgcagatgctcagagtgtggtggac
atctacgtgaactatgattgtgacttaaatgcagcaaatatatttgaaaggctggttaat
gacttatcaaagattgctcaaggaaggggtagccaagaacttggcatgtcaaatgttcag
gaattaagtttgaggaaaaaaggattggaatgcttagtatcaatcttgaaatgcatggtg
gagtggagtaaggatcaatatgtaaatcccaattcccagacaacccttggccaagaaaaa
cccacagaacaggacagcagtgaaaccaaacaccctgagacaattaacagatatggaagc
ttaaattctttggattctactgcttcatcaggaattggcagttacagcacacagatgtct
ggcactgacaacccagagcagtttgaagtcctaaagcagcaaaaggaaataatagaacaa
ggaattgacttattcaacaagaaaccaaagagggggattcagtacctgcaagaacaagga
atgcttggcactacccctgaagatattgctcaattcttgcatcaagaggaaagattagat
tcaactcaggttggggagttcctgggagacaatgataaatttaacaaagaagtgatgtat
gcatatgtagaccaacacgacttttcgggaaaggattttgtttcagcgttgcgcatgttt
ctagaagggtttcgtctaccaggagaagctcaaaaaattgatcgcttaatggagaaattt
gctgctagatatttagaatgtaaccaagggcaaactctttttgctagtgcagatactgca
tatgttttagcttactcaattatcatgttgacaacagatcttcacagtccacaggttaag
aataaaatgacaaaagaacagtatattaaaatgaatagaggtatcaatgacagtaaagat
ctccctgaagaatacttgtctgctatctataatgaaatagctggaaagaagatttcaatg
aaggaaacaaaagaattaacaatacccacaaaatccagtaaacaaagtgttgctagtgag
aagcagagaagactcctgtataacttagaaatggaacaaatggctaaaacagctaaagct
ctcatggaggcagtgagccacgttcaggccccttttaccagtgcaacacacctggagcat
gtgagacccatgtttaagttggcttggacacctttcctggccgcattcagcgtgggtctg
caggactgcgatgacaccgaggttgcctctctctgtttggagggtatacgatgtgcaatc
cgcattgcctgcattttcaacattcagcttgaaagagatgcctatgttcaagcattagca
agatttacgttgcttacagtgagttctggtattactgaaatgaagcagaagaatattgac
accattaaaactctcatcacggtggctcatacagatggaaactatttaggaaattcctgg
catgagattctgaaatgcatcagtcagcttgaactggcacagttaataggaactggagta
aaacctcgctacatctcagggacagtgcgtggcagggaaggttcttttactggaacaaaa
gatcaggcacctgatgaatttgtggggctgggactggttggtggaaacgtggattggaag
cagatagcaagtattcaggaatccattggagaaactagctcccaaagcgttgttgttgct
gtagacagaatatttacgggatctacaaggttggatggcaatgctattgtggatttcgtt
cgctggctttgtgctgtgtctatggacgagctgctgtctgccacccaccctcggatgttt
agtctacagaagatagtagagatttcttactacaacatgggccggatcaggttacagtgg
tctaggatctgggaagttattggtgatcattttaacaaggttggctgcaatcccaatgaa
gatgtagctatttttgcagtagactcattaaggcaattgtcaatgaagttcttggagaaa
ggagaacttgctaatttccgattccagaaggacttcctaagaccatttgaacatatcatg
aagagaaacaggtctcctactattcgagacatggttgtacggtgtattgcacagatggtg
aattcccaggctgctaacattcgttctggctggaaaaacattttttcagtgtttcatctg
gcagcctcagatcaggatgaaagtatagtggaactggcattccagactacaggacacatt
gtcacaatcgtgtttgagaaacacttcccagcaaccatagattctttccaggatgcagtg
aagtgcttgtctgaatttgcctgcaatgcagcatttccagataccagtatggaagcgatc
cgcctcattcgccactgtgcaaaatatgtgtctgacaggcctcaggcattcaaggaatac
acaagtgatgatatgaatgtagctcctgaagacagagtgtgggtgcgaggatggttccca
attctctttgagttgtcctgtatcatcaatagatgcaaattagatgtaagaaccaggggc
ttaacagtaatgtttgaaataatgaagacatatggccatacttatgaaaaacactggtgg
caagatttgtttcggattgtcttcaggatatttgacaacatgaaactgccagaacagcag
actgagaaagctgaatggatgacaactacttgtaaccatgcactttatgcaatctgtgat
gtatttacacagtatttagaagtacttagtgatgttcttttggatgatatatttgcacag
ctgtactggtgtgtgcagcaagacaatgaacaactggcacgatctggtacaaactgtttg
gagaatgttgtcatccttaatggtgaaaagtttaccctagaaatctgggataaaacttgc
acttgcatgctggatattttcaaaactacaatccctcatgcgctgctgacttggagacca
gttggtggggagttctgctctggctctccttctgatgcaaaagaaaaactggatacaatc
tcccagaagtcagtagacatccatgactccatccagcctcgatcttcagatggacgccca
tttcagcccagcacaggggccacggtagcagaggaagcgagtaaagccaggccagcagca
aaatttccagaacagaagttatttgctgctcttttgatcaagtgtgttgtacagctggaa
ctcattcagacgatcgacaacattgtgttcttcccagcaactagcaaaaaagaggatgca
gagaatctagcagcagcacaaagagatgcagtagactttgatgtccatgtggatacacag
gatcaagggatgtatcgtttcctgacatcacagcagcttttcaaacttcttgattgtctg
ctggaatctcacagatttgctaaagcatttaattcaaacaatgaacaaagaactgctctc
tggaaagcaggtttcaaaggcaagtccaagcccaacctgctgaagcaggagacgagcagc
ctggcctgtgggctgcgcatcctgttccgcatgtacatggacgagagccgcaccagcgcc
tgggaggaggtccagcagaggctgctgaatgtctgcagcgaggctctgagctatttcctc
actcttacgtcagaaagtcatcgggaagcctggactaaccttttactcttatttttgact
aaagtcctgaagataagtgatgaaaggttcaaggcccatgcctcattctactaccctttg
ctgtgtgaaatcatgcagtttgaccttattcctgagcttcgggctgtgttgcgaaggttt
ttcctgcggatcggggtggttttccaaatatcccaaccaccagaacaagagcctggaata
agcaagcattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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