KEGG   Geospiza fortis (medium ground-finch): 102036349
Entry
102036349         CDS       T03755                                 
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102036349
Enzymes [BR:gfr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     102036349
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    102036349
 Prokaryotic type
    102036349
SSDB
Motif
Pfam: DNA_photolyase FAD_binding_7 CLIP_1
Other DBs
NCBI-GeneID: 102036349
NCBI-ProteinID: XP_005419165
UniProt: A0A6I9HFQ2
Position
Un
AA seq 474 aa
MAGGRRRAAPSVREFKYNKKRVRLVSQGSDLKDDARCILYWMCRDQRVQDNWAFLYAQRL
ALKQELPLHVCFCLVPKYLEATIRHYRFMLRGLQEVAEECAELNISFHLLLGYAKDVLPT
FVMEHGVAGLVTDFSPLRLPRQWVEDVRERLPEDVPFAQVDAHNIVPCWLASPKQEYSAR
TIRSKIHAQLPEFLTEFPPVVRHPHPPSCPAEPIAWEACYSSLQVDHTVKEVEWATPGTA
AGMAVLKSFIAERLKSFSSHRNDPNKAALSNLSPWLHFGQVSTQRAILEVQKHRRSYKDS
VDAFVEEAVVRRELAENFCYYNENYDSVQGAYDWAQTTLKVHAKDKRPYLYSLQELEQGT
THDPLWNAAQLQMVREGKMHGFLRMYWAKKILEWTRSPEEALQFAIYLNDRYELDGRDPN
GYVGCLWSICGIHDQGWAERPIFGKIRYMNYAGCKRKFDVEQFERRYAPTHSHL
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggctggaggccgtcggagggcggccccgtccgttcgagagttcaagtacaacaaaaag
cgggttcgccttgtctcgcagggctcggacctgaaggatgatgctcggtgcatcctttac
tggatgtgccgggatcagcgagtgcaagataactgggctttcctctacgcccagcgcctg
gccctcaaacaggagctgcctctgcatgtctgcttctgcttggtgcccaaatatctggag
gccaccatccgccactacaggttcatgctgaggggcctgcaggaggtagcagaggagtgt
gcagagctgaacatctccttccacttgctgctgggctatgccaaggatgtgctgcccaca
tttgtgatggagcatggcgtggctgggctggtgacagacttcagtcccctccgcctcccc
cggcagtgggtagaggacgtcagggaacgcttgccagaggatgtgccatttgcacaggtt
gatgcccacaacatcgtgccctgctggctcgcctcccccaagcaggagtacagcgccaga
accatccggagcaagatccatgctcagctccctgagttcctcaccgagtttccccctgtt
gttcgtcacccacatccgccctcctgcccagcagagcccatcgcttgggaggcctgttat
tccagcttgcaggtggaccacaccgtgaaggaggtggagtgggcaacccctggcacagct
gcagggatggctgtgctcaagtccttcattgcagagcggctgaaatccttcagcagccac
aggaatgatcccaacaaggcggctctcagcaacctgtccccgtggcttcactttggccag
gtttccacccaaagagccatcctggaggtgcagaagcaccggcgcagttacaaggactcg
gtggatgcgtttgtggaggaggctgtggtgcggcgggagctggctgaaaacttctgctac
tacaatgagaactacgacagtgtgcagggtgcctatgactgggcacaaaccaccctgaag
gtccatgccaaagacaagaggccttatctgtacagtctgcaggagctggagcaggggacc
acacatgacccgctctggaacgctgcccagctgcagatggtccgggagggcaagatgcac
ggcttcctgcggatgtactgggccaagaagatcctggagtggacacgctcccctgaggag
gccctgcagtttgccatctacctcaacgaccgctatgagctggacgggagggaccccaat
ggatacgtaggctgcctgtggtccatctgtggcattcacgaccagggctgggcggagcgg
cccatcttcggcaagattcgctacatgaactacgccggctgcaagcgcaagtttgacgtg
gagcagttcgagcgtcgctatgcccccacacactcccatctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

Download RDF
DBGET integrated database retrieval system