KEGG   Geospiza fortis (medium ground-finch): 102036824
Entry
102036824         CDS       T03755                                 
Symbol
LIMK1
Name
(RefSeq) LIM domain kinase 1
  KO
K05743  LIM domain kinase 1 [EC:2.7.11.1]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102036824 (LIMK1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:gfr01001]
    102036824 (LIMK1)
Enzymes [BR:gfr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     102036824 (LIMK1)
Protein kinases [BR:gfr01001]
 Serine/threonine kinases: TKL group
  LISK family [OT]
   102036824 (LIMK1)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase LIM PDZ Kdo PDZ_6 RIO1 ABC1 Haspin_kinase PDZ_2
Other DBs
NCBI-GeneID: 102036824
NCBI-ProteinID: XP_014164166
Position
Un
AA seq 1310 aa
MHGGGRMSPPGHNSPECLVQVPNGFLVLSREGESQEEAFSQDSGLQGNLPNQGSEDLGDS
APLACSQVLRVCSLEPSPGRRSREPPRPRRSRLQPKLVLALEAWVELVVLVASGSPQAFA
SLAWECCPESPLELESSLKPQDWEVLEVSSLVSLWVIPSKLLSSQVAMDCPTLMVQGQCP
ESEVSLAWCPESEVSPGWCPESELSPGWCPVSELSPGWQGCRRQQQQQRQLSTAPAFPVS
VWVASPASCPESELSPGWCPVSELSPGWQGCRRQQQQQRQLSTAPAFPVSVWVASPASCP
ESELSPGWCPVSELSPGWQGCRRQQQQQRQLSTAPAFPVSVWVASPASCPESELSPGWCP
VSELSPGWQAPAFPVSVWVASPASCPESELSPGWCPVSELSPGWQVTVMGAEAPCLPCPQ
GCRRQQQQQRQLSTELAFLASLAFLVFLAFLVFLEFPVSLVFQVFLVCLGFLVLFLVLEE
QDVFLVLVFPVLAFQVLVFPVLAFPVLACLEWVCQVLACPVWCLGSAFQEVRQPLPKQPP
KQPRAVGLAPGVGGLAPGVGGLVPGVGGLVPGVGGLVPGVGGVPGVGGPAAAAKAAANAA
KFGAGVGGVPGVVPGVGGVPGVTPGVGGVPGLVPGVGVPGTGILPGAGIPQVGVQPGAKP
PKFGIGGPGFGISPVFPGGVGGLGFGGEYPLPRGCFGLGVRIPAGVSLTLLCLPAAGKPP
KPYGGALGALGFRGSDLPVCASCGQGIYDGQYLQALKADWHSDCFRCCECGASLSHQYYE
KDGRLYCKKDYWARFGELCHGCSEQITKGLVMVAGEQKYHPECFSCLNCRAFIGDGDTYA
LVERSKLYCGHCYYQMVVTPVIEQILPDSPASRIPHTVTLVSIPACSDGKRGFSVSIDQG
CGTEHPRTVRVREVDPDCISPDMKNSIHVGDRILEINGTPIGHVPLDEIDLLIQETSRLL
QLTIEHDPHEPLGQEPGLAGSPLPALCSPLRSPAPVPCGDPAAMRQRAVTRSCSTDKSPG
SGSVGSPASQRKDIGRSESLRVVSRAHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEV
MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRSL
IKSMVSPSPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARL
MVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIG
RVSADPDYLPPTTDFDAGKHPTMWPLDLPADENGTDPSPIPHLADTLWSP
NT seq 3933 nt   +upstreamnt  +downstreamnt
atgcacggcgggggcaggatgtcccctccaggtcacaattctccggagtgcctggtccag
gtgcccaacgggttcctggtgctatcccgggagggggagtcccaggaggaggctttttcc
caggactcggggctgcagggaaacctcccaaaccaggggtcggaggacttgggggactcg
gcccccttggcctgcagccaggtgctgcgggtctgttccctggagccttccccggggcgg
cgttcccgggagccgcctcggccgcggcgctcaaggctgcagccaaagctggtgctggca
ttggaggcgtgggtggaattggtggtcctggtggcctcggggtctccacaggcgttcgct
tccctggcgtgggagtgctgcccggagtccccactggagctggagtcaagcctaaagccc
caggactgggaggttttggaggtcagcagcctggtgtccctctgggttatcccatcaaag
ctcctaagctcccaggtggctatggactgccctacactaatggtccaggggcagtgcccg
gagtcggaggtgtccctggcttggtgcccggagtcggaggtgtccccggggtggtgcccg
gagtcggagctgtccccggggtggtgcccggtgtcggagctgtccccggggtggcagggg
tgccgtcggcagcagcagcagcaaaggcagctaagtacggcgccggcgttcccggtgtcg
gtgtgggtggcgtccccggcctcgtgcccggagtcggagctgtccccggggtggtgcccg
gtgtcggagctgtccccggggtggcaggggtgccgtcggcagcagcagcagcaaaggcag
ctaagtacggcgccggcgttcccggtgtcggtgtgggtggcgtccccggcctcgtgcccg
gagtcggagctgtccccggggtggtgcccggtgtcggagctgtccccggggtggcagggg
tgccgtcggcagcagcagcagcaaaggcagctaagtacggcgccggcgttcccggtgtcg
gtgtgggtggcgtccccggcctcgtgcccggagtcggagctgtccccggggtggtgcccg
gtgtcggagctgtccccggggtggcaggcgccggcgttcccggtgtcggtgtgggtggcg
tccccggcctcgtgcccggagtcggagctgtccccggggtggtgcccggtgtcggagctg
tccccggggtggcaggtgactgtcatgggggctgaggctccgtgtctcccttgtccccag
gggtgccgtcggcagcagcagcagcaaaggcagctaagtacggagctggcgttcctggca
tcgctggcgttcctggtgttcctggcgttcctggtgttcctggagttcccggtgtccctg
gtgttccaggtgttcctggtgtgcctggggttcctggtgctgttcctggtgttggaggag
caggacgtgttcctggtgttggtgttcccggtgttggcgttccaggtgttggtgttcccg
gtgttggcgttcccggtgttggcgtgcctggagtgggtgtgccaggtgttggcgtgcccg
gtctggtgcctggggtcggcgttccaggaggtccggcagccgctgccaaagcagccgcca
aagcagccaagagcagttggcctggctcctggtgtgggtggcctggctcctggtgtgggt
ggcctggttcctggagtaggtggcctggttcctggagtaggtggcctggttcctggtgtt
ggaggtgtcccaggtgttggaggtccagcagcagcagccaaagcagcagcaaatgcagcc
aaatttggtgctggggttggaggggtgccaggggtggtgcctggcgtgggcggagtgccc
ggagtgacacccggtgttggtggcgtgcccggcttggtgccaggggtgggagtgcctgga
actggcatccttcctggggcaggcatcccccaagtaggggtgcagcctggtgctaaacct
cccaaattcggcattggaggccccggcttcggcatatcaccggtatttccaggtggggtc
ggcggcctgggattcggtggtgagtacccattgccccgcgggtgttttgggctgggggtg
cgtatccccgcgggggtctcgctcaccctgctctgccttcccgctgcagggaagcccccc
aagccctatggaggagctctgggtgccctgggctttagagggagtgacctgccggtgtgt
gcgagctgtgggcagggcatctacgatgggcagtacctgcaggcactgaaggctgactgg
cactccgactgcttcaggtgttgcgagtgcggggcctccctgtcccaccagtactacgag
aaggatgggcgcctgtactgcaagaaggattactgggcacgcttcggggagctgtgccac
ggctgctctgagcagatcaccaaggggctggtcatggtggctggggagcagaagtatcac
cccgagtgcttcagctgcctcaactgccgcgccttcatcggggacggggacacgtacgca
ctggtggagcgctccaagctctactgcggccactgctactaccagatggtggtgaccccg
gtgatcgagcagatcctgccggactcgccggcctcccgcatccctcacaccgtcaccctc
gtgtccatccccgcctgctccgacggcaagcgcggcttctccgtctccatcgaccagggc
tgcggcaccgagcacccgcgcaccgtgcgcgtccgagaggtagacccggactgcatcagc
cctgacatgaagaactccatccatgttggtgaccgcatcctggagatcaacgggacccct
attggccacgtccccctggatgagatcgacctgctgatccaggagacaagccgcctgctg
cagctaaccattgagcacgacccccacgagcccctgggccaggagccagggctggcaggc
agccccctgcccgccctgtgcagccccctgcgctcaccagcccccgtgccctgcggggac
cccgctgccatgcgccagcgcgctgtcacgaggagctgcagcacagacaagtccccgggc
tcgggctccgtgggctctcccgcgtcccagcgcaaggacatcgggcgctccgagtccctg
cgcgtcgtgtcccgcgcccaccgcatcttccgcccctcggacctcatccatggagaggtg
ctgggcaagggctgcttcggccaggccatcaaggtgacgcatcgggagacgggcgaggtg
atggtcatgaaggagctgattcgcttcgatgaggagacccagaggacattcctcaaagag
gtgaaggtgatgcgctgcctggagcaccccaacgtgctcaagttcatcggagtgctctac
aaggagaagagactcaacttcatcacagagtacatcaaagggggcaccttaaggagcctc
atcaagagcatggtgagcccctccccctggagccagcgggtcagctttgccaaggacatc
gccgctggcatggcctacctccactccatgaacatcatccatcgtgacctcaactctcac
aactgcctcgtgcgagagaacaagagtgtggtggtcgctgacttcgggctggcgcggctg
atggtggatgagaagaaccagcctgaacatctcaagaacctgaagaaaccggaccgtaag
aaacgctacacggtggtggggaacccctactggatggcccctgagatgatcaatgggagg
agctatgatgagaaagtggatatcttctcctttggcatcgtcctgtgcgagatcatcggc
cgggtgagcgctgaccccgattacctgccccccaccaccgacttcgatgcagggaagcat
ccgaccatgtggcctctggacctgccagcagacgagaacgggactgaccccagccccatc
ccacacctggctgacaccctgtggtctccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (87)   
   KEGG ORTHOLOGY (1)   
   RefGene (83)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (105)   

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