KEGG   Geospiza fortis (medium ground-finch): 102037482
Entry
102037482         CDS       T03755                                 
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102037482 (GTF2E1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gfr03021]
    102037482 (GTF2E1)
Transcription machinery [BR:gfr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     102037482 (GTF2E1)
 Prokaryotic type
  Archaeal type
    TFE
     102037482 (GTF2E1)
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C TF_Zn_Ribbon PyrI_C
Other DBs
NCBI-GeneID: 102037482
NCBI-ProteinID: XP_005420634
UniProt: A0A6I9HHT6
Position
Un
AA seq 442 aa
MTDPDVLTEVPAALKRLAKYVVRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPICFSTFTDLEANQLFDPRTGTFRCTFCETEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKERAAGAGSGAAAGLAGGHHREA
WTTKGPSYEDLYTQNVVISMEDQEDLSRSAAEGKPARERPIWLRESTVQGAYDPDEIKDG
GRDLDAFQEREESRAALDDNEEVMRALLIHEKKTPSASTVTVSGAAPLSGGNASDSESET
SESEEESPPRPAATATATYGLEEEEEDEEFEVVAEDPTVTVAGRPHSYSQVSQRPELVAQ
MTPEEKEVYIAMGQRMFEDMFD
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgactgacccagacgtcctcactgaggtcccagcagctctcaagcgccttgccaaatat
gtggtgcgtggcttttatggcatcgagcatgctttggctctggacatcctcatcaggaac
ccctgtgtgaaggaggaggacatgctggaactcctcaagtttgacaggaagcagctcagg
gctgtcctcaacaccctcaagggtgacaagttcatcaaatgcaggatgagggtggagacg
gctcccgatggcaagaccacgcgccataactattactttatcaactaccgcctgctggtc
aacgtggtcaagtacaagctggaccacatgcgccgcaggatcgagaccgatgagagagac
tccaccaaccgcgcctcttttaagtgccccatctgcttcagcactttcacagatctagag
gccaaccagctgtttgaccccaggacaggaactttccgctgtacgttctgcgagactgaa
gtggaggaggatgagtcggccatgcccaagaaggatgcaaggacactggtggcgagattc
aacgagcagattgagcccatctacgcgctgcttcgggagacagaagatgttaacttagcc
tatgaaatcctggagccagaacccacagagattcctgccctgaagcagagcaaggagcgt
gcggccggtgctggttcaggagcagcagctggccttgcagggggacaccatcgggaagca
tggaccacaaagggaccatcatacgaggacttgtacacccagaacgtcgtcatcagcatg
gaggaccaggaggatctgagccggtctgcagctgaaggaaagccagccagagagagaccc
atttggctgcgggagagcacggtgcagggagcttatgaccctgatgaaatcaaagatggg
ggccgggatctggatgcattccaggagcgtgaggagagccgggcagccctggacgacaat
gaggaggtgatgcgtgccctgctcatccacgagaagaagacgccttctgcttccaccgtc
acggtcagcggtgccgctcctctctcgggcggcaacgccagtgactccgagagcgagacc
agcgagtcagaggaggagtcccctccccgccctgccgccacggccaccgcaacgtacggg
ctggaggaggaggaggaggatgaagagttcgaggtggtggcagaagaccccactgtcaca
gtggctgggcgcccgcattcctacagccaagtgagccagcgccccgagctggtggcacag
atgacaccagaggaaaaggaggtttacatagccatggggcagcgcatgttcgaggacatg
ttcgattaa

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