KEGG   Geospiza fortis (medium ground-finch): 102038174
Entry
102038174         CDS       T03755                                 
Symbol
TRIM50
Name
(RefSeq) tripartite motif containing 50
  KO
K12015  tripartite motif-containing protein 39 [EC:2.3.2.27]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gfr04121]
    102038174 (TRIM50)
Enzymes [BR:gfr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102038174 (TRIM50)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102038174 (TRIM50)
SSDB
Motif
Pfam: SPRY PRY Hemopexin YscO
Other DBs
NCBI-GeneID: 102038174
NCBI-ProteinID: XP_005425211
UniProt: A0A6I9HLP3
Position
Un
AA seq 350 aa
MGRVNTVKLQKSLESLLKEVEEVKKRESAERMKTQECKETVKKKRERIVSEFGKLHRLLA
DEEKLLLQKLEEEEKQILLLINENLARLVEEKCLLEELILEIKEKSQQPADGLLKDMKSI
LSRCEGVKFQSPKAVCVTLKENYCIPERCLGMRDMLKKFRVDVILDPETAHPDLSVSEDR
KSVRRGSKKLLLSLFDSPKRFGSAPAVLGSPGFFSGRHYWEVQVGDKPEWGLGLCREAAG
RKGSVLFSPNNGYWVLRLQNGGTYEALTVPVSPVTLSVRPRRVGIFLDYEAGEISFYNVS
DRSHIYTFTDKFSGNLRPLFFLGAFLGGRNAEPLVISWVRDPQGTGCIIL
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggggagggttaacactgtcaaactccagaaatccctggagagtcttttaaaggaagtg
gaggaggtgaagaagcgtgagtcagcagaaaggatgaaaacccaggagtgcaaggagaca
gtaaagaaaaagcgggagaggattgtgagtgagtttggtaagctacatcggctgctggct
gatgaggagaagctactgctccagaagctggaggaggaagagaagcagattctgctgctg
atcaatgaaaacttggccaggctggtggaggagaagtgcttgctggaggagctgatcctg
gagataaaagagaagagccagcagccagctgatgggctgctcaaggacatgaaaagcatc
ctgagtaggtgtgaaggagtaaaattccaatcccccaaggctgtgtgtgtgaccctgaag
gaaaactactgcattcctgagcgctgcctgggcatgagggacatgctgaagaagttcaga
gtggacgtgattctggacccagagacagcacacccagacctctctgtgtctgaggaccgc
aagagcgtccggcgtgggagcaagaagctgcttctgtccctctttgacagccccaagagg
tttggcagcgccccggcggtgctgggcagccccggcttcttctcgggccgccactactgg
gaggtgcaggtgggagacaagcccgagtggggcctggggctgtgtcgagaggctgccggc
cggaaaggctctgtcctcttctcccccaacaatggttactgggtgctgcggctgcaaaat
gggggcacctatgaggccttgaccgtacccgtgtcccccgtgaccctgagtgtgaggccc
cggcgcgtcgggatcttcctggactatgaggcgggagagatctccttctacaatgtgagc
gaccgctcccacatttacaccttcaccgacaagttctcaggcaatctccggcctctcttt
ttcttgggtgcctttttggggggcagaaatgcagaacccttggtgatctcctgggtcagg
gacccacaggggaccggatgcatcatcttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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