KEGG   Geospiza fortis (medium ground-finch): 102039170
Entry
102039170         CDS       T03755                                 
Symbol
DSE
Name
(RefSeq) dermatan sulfate epimerase
  KO
K01794  chondroitin-glucuronate 5-epimerase [EC:5.1.3.19]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gfr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    102039170 (DSE)
Enzymes [BR:gfr01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.19  chondroitin-glucuronate 5-epimerase
     102039170 (DSE)
SSDB
Motif
Pfam: DUF4962 SYF2
Other DBs
NCBI-GeneID: 102039170
NCBI-ProteinID: XP_005418495
UniProt: A0A6I9HDW0
Position
Un
AA seq 958 aa
MRTHTRGAPSVFFIHAVCFAFACGAREDQDTMVPFVNANYDSYPMLYFSKGDVETLRLQA
STTHQHIAARLIEAVQTMLSNPLEYLPPWDPKEFSARWNEIYGNNLGALAMFCVLFPENM
EAINMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKIQQERFLEV
IANASGYMYETSYRRGWGFQYLHNHQPTNCVALLAGSLVLMNQGYLQEAYLWTKQVLAIM
EKSVVLLQEVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFSHPWLKQHFAFLYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLAEQIRRNRVVEGPGTPSK
GQRWCTLHTEFLWYDASLRSVPPPDYGVPKLHYFEDWGVVTYGSALPAEINRPFLSFKSG
KLGGRAIYDIVHKNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFF
NNVLMFSPAVSKTCFSPWEGQITEDCSSKWLKYKHDLAGDCKGRVVAAMERSGVVFIRGE
GVGAYNPKLKLRKLQRNLILLHPQLLLLVDQIHLEDDSPLEAATSFFHNVDVPFEETVVD
DVHGAFIRHRDGIYKMYWMDDTGHSEKATIASRMYPRGYPYNGTNYVNVTTLLRHPVTRA
IYLFIGPSVDVQSFTVRGDSPQLDVFVTTGEHAYAVYLWPVEDGSRSAFAQVIADRQKIV
FDRASAIRSSAVPEVKDYIGIVERNLQHFKPVFQQLEKQILSRVRNTASFRKTAERLLRF
SDKRQTEEAIDRIFAISQRQQQQRGRAKKNRKVAKGYKFVDAVPDIFAQIEVNERKVRQK
AQTQAQKELPVDEDEEMKDLLDFADITYVKHKTGVSIKGRSGLAQMVATARSAPSISASY
TRLFLILNIAVFFVMLAMQLTYFQKAKRLHVQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgaggactcacacacggggagccccaagtgtgtttttcatacatgcggtttgctttgcc
tttgcctgcggtgccagggaggaccaagacacgatggttccttttgtcaatgccaactat
gacagctaccccatgctctacttctccaagggggacgtggagaccctgagacttcaggcc
agcaccacccaccagcatattgcagctcgtctgatcgaagcagtgcaaaccatgctgtcg
aatcccctggagtaccttcctccctgggacccaaaggagttcagcgctcgctggaatgaa
atttatggcaacaaccttggggccctggcaatgttctgtgtgctcttccctgaaaacatg
gaggccatcaacatggctaaggattacatggagaggatggcagctcagcctagttggcta
gtgaaggatgccccctgggatgaagtccctcttgctcactccttggttggttttgccact
gcttatgacttcttgtacaactaccttagcaagattcaacaggagagatttcttgaagta
attgccaatgcctcgggatacatgtacgaaacatcatacagacgtggatggggcttccag
taccttcacaaccaccagcctaccaactgtgtggccctgctggctggaagcctggttctg
atgaatcaaggctaccttcaggaagcttacttgtggaccaagcaagtgttggcaatcatg
gagaagtcagtagtcctgctgcaggaggtcacagatggctccctctatgaaggggtggct
tatggcagctacacaaccagatcactgtttcagtacatgtttcttgtccaaaggcatttt
gacatcaatcacttcagccacccctggctcaagcagcactttgcatttctgtacaggact
gtcctaccaggtttccagagaactgtggccatcgcagattccaactataactggttctat
gggccggagagccagctggtgtttctcgacaagtttgtcatgcgcaatggcagcgggaac
tggctggcagagcagatcagaaggaaccgagtggtggagggcccaggcacaccatccaaa
gggcagaggtggtgcactctccacactgaatttctctggtatgatgcaagtttgcgctct
gtacctccaccagactatggggttcctaagctgcattattttgaggactggggagtggtg
acttatggaagtgctttgccagctgaaatcaacaggcctttcctttccttcaagtcagga
aagctgggaggacgtgcaatatatgatattgttcataagaacaagtacaaagagtggatc
aaggggtggaggaactttaatgctggccacgaacacccagaccagaactccttcactttt
gctcccaatggcgtacctttcataacagaagctctgtatgggccaaaatatacttttttt
aataatgtcttaatgttttcccctgctgtgtccaagacctgcttctccccatgggaaggg
cagattacagaagactgttcctcaaaatggcttaaatataaacatgacttggctggcgac
tgtaagggacgagtggttgccgccatggagagaagtggggtggtttttatcaggggagaa
ggagtgggtgcatacaatcctaaactgaagctgagaaaattgcaacgaaacctcatactt
ctccacccccagcttctcttgctagtggaccaaatccacctagaagatgacagccctctg
gaggcagcaaccagtttcttccacaatgtggatgtgccttttgaagaaacggttgttgat
gatgtccatggggcctttattaggcaccgtgatgggatatataagatgtattggatggac
gacactggccacagtgagaaagccaccattgcctcgaggatgtatccccggggctacccc
tacaatggaacaaactatgtgaatgtaacgaccctgctgcggcaccctgtcacgagggcc
atctaccttttcattgggccctctgtggacgtgcagagcttcaccgtgcgtggagattcc
ccgcagctggatgttttcgtgaccactggtgagcacgcctacgccgtgtacctgtggccc
gtcgaggatggctcccgctctgcctttgcacaggttattgcagaccgccagaaaattgtc
tttgaccgagcctctgccatcaggagctccgcagtgccggaagtgaaggactacataggc
atcgtggagaggaacctgcaacattttaagcccgtcttccagcagcttgagaagcagatc
ctgtctcgtgtacgcaacacagccagctttaggaagactgctgagcgcctgctgaggttt
tcagataagaggcagacagaggaggccattgacaggatatttgcaatctcacagaggcag
cagcagcagcgtggcagagcaaagaaaaacagaaaggtagccaaaggctacaaatttgtt
gatgccgttcctgacatttttgcacagattgaggtaaatgaaagaaaagtgcgacaaaag
gcacagactcaagcacaaaaagagttgcctgtagacgaagatgaggaaatgaaagatctt
ctggactttgcagatatcacttatgtgaagcacaaaactggggtgtcaatcaaaggccga
tcagggctggcacagatggtggcgactgctcgaagtgccccatcaatatcagcttcttat
actcgcctctttctaattctgaacatcgctgttttttttgtcatgctagcaatgcagctt
acgtatttccagaaggccaagagactgcatgtccaaagatgtctgtatgcaatactttta
gtagacagctgtatattattgtggctgtattcttcctgttctcagtcacaatgttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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