KEGG   Geospiza fortis (medium ground-finch): 102040398
Entry
102040398         CDS       T03755                                 
Symbol
ATG5
Name
(RefSeq) autophagy related 5
  KO
K08339  autophagy-related protein 5
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04136  Autophagy - other
gfr04140  Autophagy - animal
gfr04216  Ferroptosis
gfr04621  NOD-like receptor signaling pathway
gfr04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102040398 (ATG5)
   04136 Autophagy - other
    102040398 (ATG5)
  09143 Cell growth and death
   04216 Ferroptosis
    102040398 (ATG5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    102040398 (ATG5)
   04622 RIG-I-like receptor signaling pathway
    102040398 (ATG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102040398 (ATG5)
   03029 Mitochondrial biogenesis [BR:gfr03029]
    102040398 (ATG5)
Membrane trafficking [BR:gfr04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    102040398 (ATG5)
Mitochondrial biogenesis [BR:gfr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    102040398 (ATG5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF6782
Other DBs
NCBI-GeneID: 102040398
NCBI-ProteinID: XP_005426654
UniProt: A0A6I9HNH4
Position
Un
AA seq 275 aa
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREADPYYLLLPRISYLTLVTDKVKKHFQKVM
RQEEVSEIWFEYEGTPLKWHYPIGLLFDLHASNTALPWSITVHFKNFPEKDLLHCHSKDV
IEAHFMACIKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFEQFWAINRKLMEYPPEDN
GFRYIPFRIYQATTERPFIQKLFRPIASGGQLHTLGDLLKDVCPSAITTEDGEQKTQVMI
HGIEPMLETPIQWLSEHMSYPDNFLHISIIPRPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atgacagatgacaaagatgtacttcgagatgtgtggtttgggcgaataccgacctgcttc
actctgtatcaggatgagataactgaaagggaagctgacccctactatttgcttttgcca
aggataagctacttgacactggtaacggacaaagtgaagaagcactttcagaaagttatg
agacaggaggaagttagtgaaatatggtttgaatatgaaggtacaccactgaaatggcat
tacccaattggtttactctttgatctccatgcatcaaatacagcccttccttggagcatc
acagtgcatttcaagaattttccagaaaaggatcttctacactgccattctaaggatgtg
attgaagctcattttatggcttgtataaaagaagcagatgctttaaagcacaaaagtcaa
gtcatcaatgaaatgcaaaaaaaggatcataagcaattgtggatgggattacagaatgat
aaatttgagcagttttgggcaataaatcgaaaactcatggagtatcctccagaagataat
ggatttcgatacatcccatttagaatttatcaggcaacaacagagagaccttttatacag
aagctatttcgaccaattgcttcaggaggacagttgcatactttgggagacctgctaaaa
gatgtgtgtcctagtgctatcaccactgaagatggagagcagaagactcaagtgatgatt
catggaattgagccaatgctggaaacacccattcagtggctaagcgaacatatgagctat
ccagataattttctccacattagtatcattccccgacctactgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system