KEGG   Geospiza fortis (medium ground-finch): 102042575
Entry
102042575         CDS       T03755                                 
Symbol
SUPT6H
Name
(RefSeq) SPT6 homolog, histone chaperone
  KO
K11292  transcription elongation factor SPT6
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gfr03021]
    102042575 (SUPT6H)
   03036 Chromosome and associated proteins [BR:gfr03036]
    102042575 (SUPT6H)
Transcription machinery [BR:gfr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     102042575 (SUPT6H)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     102042575 (SUPT6H)
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 HTH_44 SPT6_acidic Spt6_S1 HHH_3 Tex_N S1 HHH_9 SH2 Tex_YqgF
Other DBs
NCBI-GeneID: 102042575
NCBI-ProteinID: XP_005425490
UniProt: A0A6I9HP61
Position
Un
AA seq 1721 aa
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEEAEGETRVRPKKAAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQETSDYLDRGQASSFGRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINITPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQHGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQSQPSSSSRQRQQPKTNTHAAIDWGKMAEQWLQEK
EAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq 5166 nt   +upstreamnt  +downstreamnt
atgtctgactttgtggagagcgaagcagaggagtcagaggaggaatacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgatcaggatgagcaggggaacctgaaaggattcattaacgat
gatgacgatgaggaggaggaggaggaagccagtgactctggagactccgaggatgacgtt
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggacgatgaggcagaagattatggaaaggaagaacacgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaagaagaagaagaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctttgcaggaagcccaggaaatctttggcgtggactttgactac
gatgagtttgagaagtacaacgagtatgacgaggagatggaggaggagtacgagtacgag
gatgaggaggcggaaggggagacgcgcgtgcggcccaagaaggcggccaagaaacgcgtc
agccgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcaca
gaccaggacaacgagatccgcatgacagacatgcccgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttataggaat
gcctttgcaactcccaccatctccttgcaggaaacttctgactaccttgaccgtgggcaa
gccagcagctttggccgcaaggggcccagcaccatccagaagattaaagaagccctaaat
ttcatgagaaatcagcattttgaggtcccgttcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaatgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgactcgactgtttgagaagatgcaggcctaccag
tatgagcagatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggacgtgtac
aatcacttcctgctgtactatggcagagacatccccaagatgcagaatgctgccaaggct
gctcgcaaaaaacaaaagcgtatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcatgagacagagcagttccct
gcagagcccctggagctggccaaggattatgtgtgtagtcaattcccaagcccagaagca
gtgctggaaggagctcggtacatggtggctttgcagatcgccagggagcccctggtcaga
caggtcctgagacagactttccaagaacgagctaaaatcaacattacaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccaattcctgaaaatgagcctggcagaggatgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acatactttgaggaaatcaagcagttttattaccgggatgagttcagtcaccaggtgcag
gagtggaaccggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattaaagaacaagctcttagtggaggccaaggagtatgtcctcaag
gcttgcagccgcaaactgtacaactggctgaaggttgctgcatacaggccagatcaacag
gtggaggaagacgatgatttcatggatgagaaccaagggaaggggatccgggtgctgggc
attgccttttcatcagccagggaccaccctgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgactgccacatttcacaaagagaaggaatgcctggcgtgag
gaggagagggaaaagaaggcccaggatattgaaacattgaaaaaattcctcctgaacaag
aagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggat
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctcaatcggagtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgccaggccgtgtccctcgctcgccgcatccaggacccc
ctcattgagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctctgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcttagatggctctagggtccatcctgaaacctat
gaatgggccaggaaaatggcagtggatgccctggaatacgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaggacctggat
ctcgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgctct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggaaaaatgatcatctgcaatgtgactgggattgcccacaggcggccacagggagagagc
tacgaccaggcgatacggaatgatgaaactggcctttggcagtgccccttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaactaaa
tttcttagtgacaaggtggtcaagaggccagaggaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagatcgacattgagaagttcagtgcagacctgacatgcaggacc
tcagacctgatggacaagaacaacgagtggaaactgcccaaagacacctactacgacttt
gactccgaggcagcagaccacaaacaggaagaagacatgaaaagaaagcagcagaggacg
acgtacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgatcatccggcccagcagcaaaggg
gagaaccacctgactgtcacctggaaggtcaacgatggcatctaccagcacgtggatgtc
cgggaggagggcaaggagaatgccttcagcctgggctccatgctctggatcaacacagag
gaatttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccatactttattagt
gcctgtaaagacctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccggagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtatcacc
cccagcagcagcagtcggaccaggactccagcctccattaatgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaatgctctaccacagaacatgacctcccagatg
ttcagtgccattgctgctgtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagcacggctacgggggcagcggaggcggcagcagcgcgtaccacgtc
ttcacaactccagcacagcagccagtggccacccctctgatgacccccagctactcctac
actactcccagccagcccatcaccacaccccagtaccagctgcaggccaacaccacaccc
cagtccacgcagtcccagtcgcagccctcatccagctccaggcagaggcagcagccaaag
accaacacccacgctgccatcgactggggcaagatggccgagcagtggctgcaggagaag
gaggctgagcggaggaaacagaagcagaggttgacccctcgcccttctcccagccccatg
atcgagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatggat
cgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (40)   

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