KEGG   Geospiza fortis (medium ground-finch): 102042943
Entry
102042943         CDS       T03755                                 
Symbol
HERC3
Name
(RefSeq) HECT and RLD domain containing E3 ubiquitin protein ligase 3
  KO
K10614  E3 ubiquitin-protein ligase HERC3 [EC:2.3.2.26]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102042943 (HERC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gfr04121]
    102042943 (HERC3)
Enzymes [BR:gfr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     102042943 (HERC3)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  HECT type E3
   102042943 (HERC3)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2
Other DBs
NCBI-GeneID: 102042943
NCBI-ProteinID: XP_005418181
Position
Un
AA seq 1050 aa
MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLE
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYISLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRYENQ
NLQXPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILVQKDNREEFVEAYVNYIFNV
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHEFSLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTPSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgctatgctggggctactcgtcttatggacagcctggcataggtagcaacctccaggtc
atcattcctgaaccacaggtgtatggcttcatccacgacagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgttggaagatggggaggtgtatacctgtggcctg
aacaccaaaggtcagctggggcatgactgtgaaggaagcaagccagagccgatcggggcg
ctggccgggcagcacatcgtgcacgtggcctgtggggagtcgcacagcgtggccctcagt
gaccagggccagctcttctcctggggcgcgggcagcgacgggcagctggggctcaccacc
atagaggatgcagtgacagtgccaaggttgataaagaaattgaaccaacagacgatactg
caggtttcctgtggaaattggcattgcctggctctggcagcagatggccagttcttcaca
tgggggcagaacagctacggtcagctgggcttgggcaaagaatgtccctcccaagccagt
ccacagcgtgtcaagtctctagatgggatccctttggctcaggttgctgcaggtggagcc
cacagttttgccctttctctctcaggagctgtgtttggctgggggaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagagtccccgtgccacgtgaagctgctgcgc
tctcagaaggttgtttacatcagctgtggagaggagcacactgcagtcctgacaaagagt
ggaggggtgttcaccttcggtgcaggttcctgcgggcagctgggccacgactccatgaat
gatgaggtgaacccccgaagagttctcgagctcatgggcagtgaagtgtcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgtgaagtgtccctctcct
gtcaagggtcactgggcggctcacaatgggcaactctcagggaaacctgatgcctgtaaa
taccacattgttaaacatatcttctctggaggagaccaaacttttgtgctttgctccaaa
tacgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaatcgatgaacattttaaaaccagtccaaagatcccagggattgatctg
aactccacgagagtgctgtttgagaagctgatgaactcccagcactccattctcctagag
cagatactgaagagctttgaaagctttttgattcctcaactgtccagctctccacccgat
gttgaggcaatgaggatctatctgattctcccagaattcccaccattccaagactccaag
tattacatctctctgacccttcctctagcaatggctattttgcgcctggacaccaacccc
agcaaagtgcttgataactggtggtctcaggtgtgcccaagatatttcctcaggcttgtg
gacctctacaaaggtgcagtggtttacctcctcagtggaaggaagacgctgctgatccca
gtcctgttcagcagctacattacagctgctctcaggcttctggagaaactccacaaggtg
aatcagaaggttaaacacgtggaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaggattatctcatgtggtttttgcaccaggctggaatgaaagtaagg
ccgtccatcatgcaggatgctgtgactctctgctcttaccctttcatctttgatgctcaa
gctaagaccaagatgttacagacagatgcagaattacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcacgttcgcaggagtaacttagttggtgatgctttaagggagttgagc
atccattcagacattgacttgaaaaaacctctcaaagtcatctttgatggtgaggaagct
gttgatgctggaggagtgacaaaggaatttttcctcctgttgttgaaagaactgctcaac
cccatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaatctac
aatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaatgtg
aagccctgcctagaggatttgaaggagctgtcccctacagaaggaaggtatgaaaatcaa
aatttgcagnnccctggggaagatgtggaggagacgttctgtttgaattttacaatctgc
agggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaatcctg
gtgcagaaggacaacagggaagaatttgtcgaagcctacgtaaattacatcttcaacgtt
tccatccacgagtggtacacagccttttctactggcttcctgaaagtgtgtggagggaag
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagtgctgtctataagggagactacactgccacccacccg
actgtgagaatgttctgggagaccttccatgaattttctttggaaaagaagaagaaattt
ctcttgttcctgacgggcagcgaccgcatccccatctatggcatgtccagcctgcgcatc
atcatccagtcgacgcccagcggggagcagtacctgcccgtggcccacacctgctacaac
ctgctggacctgcccaagtacagcagcaaggagatcctcagcgcccgcctcgtgcaggcc
atcgaccactacgagggcttcagcttggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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