KEGG   Geospiza fortis (medium ground-finch): 102045503
Entry
102045503         CDS       T03755                                 
Symbol
PSMC6
Name
(RefSeq) proteasome 26S subunit, ATPase 6
  KO
K03064  26S proteasome regulatory subunit T4
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03050  Proteasome
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    102045503 (PSMC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gfr03051]
    102045503 (PSMC6)
Proteasome [BR:gfr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     102045503 (PSMC6)
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_16 AAA_22 AAA_5 AAA_2 RuvB_N nSTAND3 AAA_14 DUF815 AAA_18 AAA_7 TIP49 RNA_helicase AAA_33 Mg_chelatase AAA_3 bpMoxR DUF5906 TsaE NACHT AAA_28 AAA_24 AAA_25 AAA_11 ATPase AAA_17 Parvo_NS1 IstB_IS21 AAA_19 PhoH
Other DBs
NCBI-GeneID: 102045503
NCBI-ProteinID: XP_014167344
UniProt: A0A8N5F5V6
Position
Un
AA seq 288 aa
MTTLTIMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQR
VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR
PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA
DLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaccactctgactattatgagatacctgcccagggaagtggatccactggtttataac
atgtctcatgaggacccaggagatgtttcctactctgagatcggaggcctgtcagaacaa
atccgagagttacgggaggtcattgaactgccactgacaaacccagaattgttccagcgt
gtgggaattatccctcccaaaggctgcctgctctacggtccccctggcacaggaaaaacc
cttttggccagagcagttgccagccagctggattgcaacttcctcaaggtggtgtccagt
tccatagtggacaaatacatcggcgagagcgctcggctgatccgagagatgttcaattat
gccagagatcaccagccctgcatcattttcatggatgagatcgatgctattggtgggcgc
cgcttttccgaaggcacatcagctgatagagaaattcagaggactctgatggagttgttg
aatcagatggatggatttgacactctgcacagagttaaaatgatcatggctaccaacaga
cctgacaccctggaccctgccctgctgcggcctggaaggctggatagaaaaatccatatc
gatctaccaaatgaacaagccagattagatattttgaagattcatgcaggtcctatcact
aaacatggtgagatagattatgaagcaatcgtgaagctttcagatggcttcaacggagca
gacttgagaaacgtctgtactgaagcagggatgtttgctatccgtgctgatcatgacttc
gtagttcaggaagatttcatgaaagctgtcaggaaagtggctgattccaagaagctggag
tccaagcttgactacaaacctgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (70)   

Download RDF
DBGET integrated database retrieval system