KEGG   Gallus gallus (chicken): 100857875
Entry
100857875         CDS       T01006                                 
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X1
  KO
K06081  poliovirus receptor-related protein 1
Organism
gga  Gallus gallus (chicken)
Pathway
gga03266  Virion - Herpesvirus
gga04514  Cell adhesion molecules
gga04520  Adherens junction
gga05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    100857875 (NECTIN1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100857875 (NECTIN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    100857875 (NECTIN1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100857875 (NECTIN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:gga04515]
    100857875 (NECTIN1)
   04090 CD molecules [BR:gga04090]
    100857875 (NECTIN1)
Cell adhesion molecules [BR:gga04515]
 Immunoglobulin superfamily
  Nectin family
   100857875 (NECTIN1)
CD molecules [BR:gga04090]
 Proteins
  100857875 (NECTIN1)
SSDB
Motif
Pfam: C2-set_2 V-set Ig_3 Ig_2 ig I-set Insulin_TMD C1-set Syndecan TM_ErbB1 DUF4381
Other DBs
NCBI-GeneID: 100857875
NCBI-ProteinID: XP_024999005
CGNC: 65186
Position
24:4060551..4132678
AA seq 523 aa
MASQLQTSCRASWWTIGVCILAAALFPGLQAQTVLVNDTVSGYIGTDVVLHCSFTNPLPN
VKITQVTWQKVTNGTKQNVAIYNPAMGVSILPPYKERVTFRNPSFKDGTIQLSRLELEDE
GVYICEFATFPTGNRESQLNLTVLAKPTNRMEGTTRPLIAKSGRTEKILVATCISSNGKP
PSTVTWDTKLKGEAEFQEIRNSNGTFTVISRYRLVPSREAHRQQLMCVVNYQLDRFTDSI
TLNVQYEPEVTIEGFDGNWFLNRKDVKLICKSDANPPAHTYEWKLPNGTLPGSVEIQNNT
IYFKGPVSYSVAGTYICEASNAIGTRSGLVEVNVTDKPLPQGALGGIIGIVGGVIAAALI
LGVAVTVFIVYRRQQKDRTEADHDLIDLPPSHKPAPPPKRKQELKSHLTAEDIQVVHLDN
MTHEEELQKLPLQPPYYDMAASEPSAYTDKLNFGKCHSEIPNASDYLTRCYSHDGRYLQK
IPHVYAPLSDLPQDLYPHHSDISFCCPPPGSRAPYICPKEQYV
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcttcacagctgcagacaagttgccgtgcatcttggtggactatcggagtttgcatc
ctggcggccgcgctctttccagggctgcaagctcagactgtcttagtcaatgacacagtc
tcggggtacattgggacagacgtcgtcctgcactgcagcttcaccaacccgctccccaat
gtgaagatcacgcaggtcacgtggcagaaggtcaccaacggcaccaagcagaatgtggcc
atctacaaccccgccatgggggtctccatcctcccaccctacaaagaacgggtgactttc
cggaacccttccttcaaagatggcaccattcagctctctcggcttgagttggaggatgag
ggagtttacatctgtgagtttgccaccttcccgaccggcaaccgggaaagtcaactgaac
ctcacagtgctggccaagcccacgaatcggatggagggcaccacgcggccgcttatcgcc
aagtctggcaggacagaaaagatcttggtagccacttgcatctcctccaacgggaagccc
cccagcaccgtcacctgggacaccaagctcaaaggggaagcagagtttcaggagatccgg
aatagcaacggcaccttcacggtgatcagccggtaccgcttggtgccgagccgcgaagcc
caccggcagcagctcatgtgtgtggtcaactaccagctggaccgcttcacggacagcatc
accctcaacgtgcagtatgagccagaagtcaccatcgagggctttgatggcaactggttc
ctcaatcggaaagatgtcaagctgatatgcaagtccgatgccaaccccccggctcacacc
tacgaatggaagctgccaaacgggactctgccagggagtgtggaaatccagaacaacacc
atctatttcaagggtcctgtctcctacagcgtggctggcacctacatctgcgaggcctcc
aacgccatcggcacgcggtcgggcttggtggaagtcaatgtcacagacaagccactacct
cagggcgccctgggaggcatcattggcatcgtgggaggtgtcatcgccgcagctctcatc
cttggcgtggctgtcaccgtcttcattgtctacaggaggcaacagaaggaccgcacagag
gcagaccatgacctcattgacttgcctccctcccacaaacctgcccctccgccgaagagg
aagcaggagttgaaaagccacctgactgctgaagacatccaggttgttcacttggacaac
atgacgcatgaggaagagctccagaagctccccctgcagcccccatactacgacatggca
gccagtgagccctctgcctacaccgacaagctgaactttggaaagtgtcactcagagata
ccgaatgcgagtgattacctgacccgctgctactcacacgacggtcggtatctgcagaag
atcccccacgtctacgccccgctgtcagacctcccacaagatctctaccctcaccactcc
gacatctccttctgctgcccccctcctggctcccgggctccgtacatctgtcctaaggaa
cagtatgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (48)   

Download RDF
DBGET integrated database retrieval system