KEGG   Gallus gallus (chicken): 100858979
Entry
100858979         CDS       T01006                                 
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain precursor
  KO
K19479  collagen type X alpha
Organism
gga  Gallus gallus (chicken)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 100858979
NCBI-ProteinID: NP_001383356
CGNC: 64139
Ensembl: ENSGALG00000014965
UniProt: A0A8V0YNG0
Position
3:63657274..63709540
AA seq 674 aa
MHLQISLLLLFCLNIVHGSDGYFSERYQKQSSIKGPPHFLPFNVKSQGVQMRGEQGPPGP
PGPIGPRGQPGPAGKPGFGSPGPQGPPGPPGPPGFSTVGKPGMPGLPGKPGERGLNGEKG
EAGPVGLPGARGPQGPPGIPGPAGLSVPGKPGPQGPPGAQGPRGLPGEKGEPGVPGINGQ
KGEMGFGVPGRPGNRGLPGPQGPQGLPGPAGIGKPGENGLPGQPGMKGDRGLPGARGEAG
IPGPQGPPGEPGEVGIGKPGPMGPPGPAGIPGAKGLPGPAGLPGSPGLPGFGKPGLPGMK
GHRGPEGPPGFPGPKGDQGPAGVPGEPGPAGPQGNMGPQGLKGLPGENGLPGPKGDMGPV
GPAGFPGAKGERGLPGLDGKPGYPGEQGLPGPKGHPGLPGQKGDTGHAGPPGLPGPVGPQ
GVKGVPGINGEPGPRGPSGIPGIRGPIGPPGMPGAPGAKGEAGAPGLPGPAGIATKGLRG
PMGPPGPPGPKGNSGEPGLPGPPGPPGPPGQSTIPEGYVKGESRELSGMSFMKAGANQAL
TGMPVSAFTVILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRIPGLYYFSYHVHAK
GTNVWVALYKNGSPVMYTYDEYQKGYLDQASGSAVIDLMENDQVWLQLPNSESNGLYSSE
YVHSSFSGFLFAQI
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgcatttacaaatatcgttactgctgctgttttgtctaaacattgtccatggcagtgat
ggatacttttctgagcgataccagaaacagtccagcatcaaggggccaccacactttcta
ccattcaatgtaaagagtcaaggtgtgcagatgaggggtgaacaagggccccctggtccc
ccaggccctattggaccaagaggacaaccaggtcctgcaggaaaacctgggtttggaagc
cctggaccccaaggtccccctggtcccccaggaccacctggattctccactgttggaaaa
ccaggcatgccaggtctaccagggaagccaggagaaagaggattaaatggtgagaaagga
gaagccggacccgttgggctcccaggagcaagagggccacaaggaccccctggcattcct
ggccctgcaggactgtctgtccctggaaagccaggaccccaaggccctccaggagctcaa
gggccaagaggcctccctggtgagaaaggagaaccaggtgttcctggtataaatggacaa
aaaggagaaatgggatttggtgttccaggccgcccaggtaacaggggtcttccaggccca
cagggaccccaaggcctccctggtcctgctgggatagggaagcctggagaaaatggcctt
ccaggtcagccaggtatgaaaggtgacagaggtctaccaggagcacgtggagaagctggt
atcccaggcccccagggtccaccaggagaacctggagaagttggcatcggcaagcctggg
ccaatgggaccaccaggaccagcaggcatccccggagccaaaggattgcctggacctgca
ggcctgcctggatccccaggtcttccaggatttggaaagccaggattgccagggatgaag
ggacatagaggacctgaaggacctcctggctttccaggacctaaaggagaccaaggccca
gctggtgtaccaggagaaccaggtcctgctgggccacaaggaaatatgggccctcaagga
ctcaaaggcttgcctggtgagaatggcttacccggacccaaaggtgacatgggccctgta
ggccctgcaggattcccaggagccaagggtgaaagaggtctaccaggattagatggtaaa
ccaggatatccaggtgagcagggtcttcctggtcctaagggacatccaggtctccctggt
caaaaaggagacactggccatgctggcccacctggcttgcctggtccagttggaccacaa
ggagttaagggagttccaggtattaatggtgaaccaggcccaagaggaccttcaggaata
cctgggatcagaggccccattggtccccctggcatgccaggagcccctggtgcaaaaggt
gaggcaggagcaccaggactgccaggcccagcaggtattgctacaaaaggtttaagagga
cccatgggaccacctggacctcctggacctaaaggcaacagcggagagcctggcttgcca
ggtccccccggtcctcctggtccccctggccaatccacaatcccagaaggttatgttaaa
ggagagtctagagaactatcaggaatgtctttcatgaaagcaggagcaaatcaagctctc
acaggaatgccagtgtctgccttcactgtcattctctcaaaagcctaccctggggcaaca
gtccccatcaaatttgacaaaatcttgtacaacagacagcaacactatgatcccaggaca
ggaatctttacctgcaggatccctggactatactatttctcctatcatgtacatgcaaaa
ggaacaaatgtttgggttgcactctataaaaatggctccccagtcatgtacacttatgat
gaataccagaaaggataccttgaccaggcctcaggcagtgctgtcattgatctcatggag
aacgatcaagtgtggctccagctgccaaattcagaatccaatggtctctattcctctgaa
tatgttcattcttctttctcaggtttcctatttgctcaaatctaa

  All links  
Gene (30)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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