KEGG   Gallus gallus (chicken): 100859719
Entry
100859719         CDS       T01006                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X2
  KO
K10756  replication factor C subunit 3/5
Organism
gga  Gallus gallus (chicken)
Pathway
gga03030  DNA replication
gga03410  Base excision repair
gga03420  Nucleotide excision repair
gga03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100859719 (RFC5)
   03410 Base excision repair
    100859719 (RFC5)
   03420 Nucleotide excision repair
    100859719 (RFC5)
   03430 Mismatch repair
    100859719 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gga03032]
    100859719 (RFC5)
   03036 Chromosome and associated proteins [BR:gga03036]
    100859719 (RFC5)
   03400 DNA repair and recombination proteins [BR:gga03400]
    100859719 (RFC5)
DNA replication proteins [BR:gga03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100859719 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100859719 (RFC5)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100859719 (RFC5)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100859719 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100859719 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 AAA AAA_assoc_2 DNA_pol3_delta DEAD Thioredoxin_6 Gp44_lid Hydantoinase_B
Other DBs
NCBI-GeneID: 100859719
NCBI-ProteinID: XP_015150373
CGNC: 63430
Ensembl: ENSGALG00000026517
Position
15:complement(11491812..11494693)
AA seq 255 aa
MVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKF
TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQEEGVDVSEDGMKAL
VTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKADIANILDWMLNQKFSTAYRK
IMELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYRLAAGTSEKVQLSSL
IAAFQVTRDLIVAEA
NT seq 768 nt   +upstreamnt  +downstreamnt
atggtgctggagctgaatgcatcggatgaccgcggcatcgatatcgtgcgagggcccatc
ctgagctttgccagcaccaggaccatcttcaagaaaggcttcaagctcgtcatcctggat
gaagctgatgccatgacacaggacgcacagaacgccctgcggcgagtgattgagaagttc
accgagaacacgcgcttctgcctcatctgcaactacctctccaagatcatccccgcgctg
cagtcccgctgcacccgctttcgcttcgggcccctcaccccagagctgatggtgcctcgg
ctgcagcacgtcatccaggaggagggggtggacgtgagtgaggacgggatgaaggcgctg
gtgaccctctcgagcggtgacatgcgcagagccctcaacatcctgcagagcacctccatg
gccttcgggaaagtgacggaggagaacgtctacacgtgcacaggacaccccctcaaggcc
gacatcgccaacatcctcgactggatgctcaaccagaagttctccaccgcctaccgcaaa
atcatggagctgaagacactgaagggcctggctctgcaggacatcctcaccgagatccac
ctcttcgtgcacagagttgatttcccaccctcggtccgcatccagctgctgatcaagatg
gcagacatcgagtaccgactggctgcaggcaccagcgagaaggtgcagctgagctccctc
atcgcagcatttcaggtcaccagggacctgattgtggctgaagcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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