KEGG   Gallus gallus (chicken): 395683
Entry
395683            CDS       T01006                                 
Symbol
MMP13
Name
(RefSeq) collagenase 3 precursor
  KO
K07994  matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gga01002]
    395683 (MMP13)
Peptidases and inhibitors [BR:gga01002]
 Metallo peptidases
  Family M10
   395683 (MMP13)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_5 Reprolysin_4 DUF4953 MerR_2
Other DBs
NCBI-GeneID: 395683
NCBI-ProteinID: NP_001280019
CGNC: 49430
Ensembl: ENSGALG00000017183
UniProt: A0A7L8YSP2 O93363
Position
1:183731120..183738421
AA seq 471 aa
MHPRLSAVFFFLLGLSFCLTVPIPLDDSHEFTEEDLRFAERYLRTHYDLRPNPTGIMKKS
ANTMASKLREMQAFFGLEVTGKLDEETYELMQKPRCGVPDVGEYKFFPRKLKWSNTNLTY
RIMSYTSDLRRAEVERAFKRAFKVWSDVTPLNFTRIRSGTADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPDYGGDAHFDDDETWSDDSRGYNLFLVAAHEFGHSLGLEHSRDPGALM
FPIYTYTGKSGFVLPDDDVQGIQELYGAGDRDPNPKHPKTPEKCAADLSIDAITKLRGEM
LVFKDRFFWRLHPQMVEAELVLIKSFWPELPNKIDAAYENPIKDLVFMFKGKKVWAMNGY
DIVEGFPKKIYEMGFPKEMKKIDAVVHIDDTGKTLFFTGNKYWSYDEETEVMDTGYPKFI
EDEFAGIGDRVDAVYHRNGYLYFFNGPLQFEYSIWSKRIVRILHTNSLFWC
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgcatcccagactttcagctgtcttcttcttcttgctgggtctgtcattttgtctgaca
gtccctattcctcttgatgatagccatgaattcacagaggaagacctccggtttgcagag
cgctacctcaggactcactatgatctccgtccaaatcccactggcattatgaagaagagt
gccaatacaatggcctctaaacttcgagaaatgcaagctttttttggattagaggtgacg
ggaaaattagatgaagaaacatacgagctcatgcagaaaccacgatgtggcgtcccagat
gtgggggaatataaatttttccctcgaaaactcaaatggtcaaacactaatttaacgtac
agaattatgagttacacatcagatctgagacgtgctgaagtagagagagctttcaaaaga
gcattcaaggtttggtctgatgtgacaccccttaacttcaccagaatacgaagtggtact
gctgatatcatgatctcctttggcactaaagaacatggtgacttttacccctttgatgga
ccctctggattactggctcatgccttccctcctggtccagactatggaggagatgcccat
tttgatgatgatgaaacttggtcagatgattctagagggtataacttgtttcttgttgct
gctcatgaatttggccattcactgggactggaacactccagagaccctggagcactgatg
ttcccaatttacacatatactggaaaatctggttttgtgcttcctgatgatgatgtgcaa
gggatccaagagctctatggtgctggagacagagatcccaacccaaaacatcccaaaacg
ccagagaaatgtgctgcagatttatcgattgatgccataacaaaacttcgtggagaaatg
ctggtcttcaaggacaggtttttctggcgactgcacccgcagatggttgaagcagaactt
gttttaattaaatccttttggccggagcttccaaacaaaatagatgcagcttatgaaaat
cccattaaagatcttgtcttcatgtttaaaggaaagaaggtttgggctatgaatggctat
gacatagttgaaggctttcctaaaaagatatatgaaatgggattcccaaaagaaatgaaa
aaaatagatgcagtggtccatattgatgatactggcaagactctcttttttacagggaat
aagtactggagttatgatgaagagacagaagttatggacacaggctaccccaagttcata
gaagatgaatttgcaggaattggtgatagagtggatgcagtctaccatagaaatggttac
ctctacttcttcaatggaccgttgcagtttgaatacagcatctggagcaaaagaattgtc
cgcatcctgcatactaactccttattttggtgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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