KEGG   Gallus gallus (chicken): 396090
Entry
396090            CDS       T01006                                 
Symbol
CTSD
Name
(RefSeq) cathepsin D precursor
  KO
K01379  cathepsin D [EC:3.4.23.5]
Organism
gga  Gallus gallus (chicken)
Pathway
gga04140  Autophagy - animal
gga04142  Lysosome biogenesis
gga04145  Phagocytosis
gga04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:gga00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    396090 (CTSD)
   04142 Lysosome biogenesis
    396090 (CTSD)
   04140 Autophagy - animal
    396090 (CTSD)
  09143 Cell growth and death
   04210 Apoptosis
    396090 (CTSD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gga01002]
    396090 (CTSD)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gga04147]
    396090 (CTSD)
Enzymes [BR:gga01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.23  Aspartic endopeptidases
    3.4.23.5  cathepsin D
     396090 (CTSD)
Peptidases and inhibitors [BR:gga01002]
 Aspartic peptidases
  Family A1: pepsin family
   396090 (CTSD)
Exosome [BR:gga04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   396090 (CTSD)
SSDB
Motif
Pfam: Asp TAXi_N TAXi_C
Other DBs
NCBI-GeneID: 396090
NCBI-ProteinID: NP_990508
CGNC: 4989
Ensembl: ENSGALG00000006613
UniProt: Q05744
Position
5:13730654..13744045
AA seq 398 aa
MAPRGLLVLLLLALVGPCAALIRIPLTKFTSTRRMLTEVGSEIPDMNAITQFLKFKLGFA
DLAEPTPEILKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHH
KYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIA
AKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSFYLNRDPTAQPGGELLLGGTDP
KYYSGDFSWVNVTRKAYWQVHMDSVDVANGLTLCKGGCEAIVDTGTSLITGPTKEVKELQ
TAIGAKPLIKGQYVISCDKISSLPVVTLMLGGKPYQLTGEQYVFKVSAQGETICLSGFSG
LDVPPPGGPLWILGDVFIGPYYTVFDRDNDSVGFAKCV
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggcgccccgcggccttctcgtcctgctgctcctcgccctggtggggccctgcgcggca
ctcatcaggatccccctcaccaaattcacctccacgcgccgcatgctgaccgaggtgggc
agcgagatccctgacatgaacgccatcacccagttcctcaagttcaagctgggttttgct
gacctggctgagcccaccccggaaatcctcaagaattacatggatgcccagtattatggc
gagattggcattgggacccccccacagaagttcactgtggtctttgacacgggctcctcc
aacctctgggtgccgtcagtgcactgtcacctgctagacatcgcctgtttgctacaccac
aagtatgatgcgtccaaatctagcacctatgtggagaatggcactgagtttgccatccac
tatgggactgggagcctctctggattcctgagccaggacacagtcacacttggtaacttg
aaaatcaagaaccagatcttcggggaggctgtgaagcagccaggcatcaccttcattgct
gccaagttcgatggcatcttgggcatggcattcccgagaatctctgtggacaaggtcaca
cctttctttgataatgtcatgcagcagaagctgattgagaaaaacatcttctccttctac
ctgaacagggatcccacagctcagccaggcggtgagctgctgcttggggggactgacccc
aaatactacagtggtgacttcagctgggtgaatgtcacacgcaaagcctactggcaggtc
cacatggactcggtggatgttgccaatgggctgaccctttgcaaagggggctgcgaggcc
attgtggacacaggcacttccctcatcactggccccaccaaggaagtgaaggagctgcaa
acagccattggtgcaaaaccactcatcaaaggccagtacgtgatctcctgtgataagatc
tcgtctctgcctgttgtcacactcatgctaggtgggaagccctaccagctcactggggag
caatacgtcttcaaggtttctgcacaaggagagaccatctgcctgagtgggttttctggc
ctggatgtcccaccacctggaggcccactctggatcctgggagatgtcttcattggcccc
tactacactgtctttgaccgtgataacgactctgttggtttcgccaaatgtgtctaa

  All links  
Gene (15)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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