KEGG   Gallus gallus (chicken): 396343
Entry
396343            CDS       T01006                                 
Symbol
SDC3
Name
(RefSeq) syndecan-3 precursor
  KO
K16337  syndecan 3
Organism
gga  Gallus gallus (chicken)
Pathway
gga04514  Cell adhesion molecules
gga04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gga00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    396343 (SDC3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    396343 (SDC3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:gga00535]
    396343 (SDC3)
Proteoglycans [BR:gga00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   396343 (SDC3)
SSDB
Motif
Pfam: Syndecan ECF_trnsprt
Other DBs
NCBI-GeneID: 396343
NCBI-ProteinID: NP_990714
CGNC: 354
Ensembl: ENSGALG00000035184
UniProt: P26261
Position
23:complement(550252..568556)
AA seq 405 aa
MPAELRRLAVLLLLLSARAALAQPWRNENYERPVDLEGSGDDDPFGDDELDDIYSGSGSG
YFEQESGLETAVSLTTDTSVPLPTTVAVLPVTLVQPMATPFELFPTEDTSPEQTTSVLYI
PKITEAPVIPSWKTTTASTTASDSPSTTSTTTTTAATTTTTTTTISTTVATSKPTTTQRF
LPPFVTKAATTRATTLETPTTSIPETSVLTEVTTSRLVPSSTAKPRSLPKPSTSRTAEPT
EKSTALPSSPTTLPPTEAPQVEPGELTTVLDSDLEVPTSSGPSGDFEIQEEEETTRPELG
NEVVAVVTPPAAPGLGKNAEPGLIDNTIESGSSAAQLPQKNILERKEVLIAVIVGGVVGA
LFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgcccgcggagctgcggcgcctcgcggtgctgctgctgctgctcagcgcccgcgcagcg
ctggctcagccgtggcgcaatgagaactacgagaggccggtggacctggagggctctggg
gatgatgatccctttggggacgatgaactggatgacatctactcgggctccggctcaggc
tattttgagcaggagtcagggttggagacagcggtcagcctcaccacggacacgtccgtc
ccactgcccaccacggtggccgtgctgcctgtcaccttggtgcagcccatggcaacaccc
tttgagctgttccccacagaggacacgtcccctgagcaaacaaccagcgtcttgtatatc
cccaagataacagaagcaccagtgatccccagctggaaaacaaccaccgccagtaccact
gccagtgactcccccagtaccacctccaccaccaccaccacggctgctaccaccaccaca
accaccaccaccatcagcaccactgtggccacctccaagcccaccactacccagaggttc
ctgcccccctttgtcaccaaggcagccaccacccgggccaccaccctggagacgcccacc
acctccatccctgaaaccagtgtcctgacagaggtgaccacatcacggcttgtcccctcc
agcacagccaagccgaggtccctgccaaaaccaagcacttccaggactgcagaacccacg
gaaaaaagcactgccttgccttccagccccaccacgctgccacccacagaagccccccag
gtggagccaggggagttgacgacagtcctcgacagtgacctggaagtcccaaccagtagt
ggccccagcggggacttcgagatccaggaggaggaggagacaactcgtcctgagctgggc
aatgaggtggtggcagtggtgacaccaccagcagcaccggggctgggcaagaatgcagag
ccggggctcatcgacaacacaatagagtcgggcagctcggctgctcagctcccccagaaa
aacatcctggagaggaaggaagtgttgatagctgtgattgtcggcggtgtggtgggagcc
ctctttgctgccttccttgtcatgctgctcatctaccggatgaagaagaaggacgagggc
agctatacattggaggaacccaaacaagccaacgtgacctaccagaagccggacaagcag
gaggagttctatgcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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