KEGG   Gallus gallus (chicken): 396371
Entry
396371            CDS       T01006                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
gga  Gallus gallus (chicken)
Pathway
gga04530  Tight junction
Brite
KEGG Orthology (KO) [BR:gga00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    396371 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gga03000]
    396371 (YBX3)
   03041 Spliceosome [BR:gga03041]
    396371 (YBX3)
Transcription factors [BR:gga03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    396371 (YBX3)
Spliceosome [BR:gga03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    396371 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB
Other DBs
NCBI-GeneID: 396371
NCBI-ProteinID: NP_990737
CGNC: 49776
Ensembl: ENSGALG00000031890
UniProt: A0A8V0ZPU8
Position
1:79075430..79099953
AA seq 291 aa
MSEAAETGTASGTAPAAAAPAPPPPPPAAAPPDVKPKSPVSGAAPGASGGEVAPAASGSA
AATTAAAAAGETEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRK
YLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPR
SGVEGEIKDGVTEGGQIHQQVQRNPTYRPRYRRGPLRPRPAPVAGEAENKENQHEAGAVS
QQPLRRGYRRPYNYRRRPRPPNTPAQDGKETKVTETPAENPAPVTEQSGAE
NT seq 876 nt   +upstreamnt  +downstreamnt
atgagcgaggcggcggagaccggcaccgctagcggcacggcgcccgccgcagctgccccc
gcgccaccgccgccgccccctgctgccgcccctccggacgtcaagcccaagagccccgtc
agcggcgccgcgccgggagcttcgggcggcgaggtggcacccgccgcgtccggctccgcg
gcagctaccaccgctgccgccgccgcaggggagacggagaagaaagtgctcgcaacaaaa
gttcttggcacggtcaagtggttcaacgtcagaaatggatacggctttatcaacagaaat
gataccaaagaagatgtgtttgttcatcagactgctataaagaagaacaacccacggaag
tatctgcgcagtgttggtgatggagagactgtagaatttgatgtggtcgagggagagaag
ggtgcagaggcagctaatgtcactgggccagatggagtccctgtagaaggcagccgctat
gctgcagacagacgccgctatcgacgtggctattttggcagacgccgtggaccacctcga
agtggtgttgagggagaaatcaaggatggggttacagaaggaggacaaattcatcagcaa
gtccaaaggaatcctacttatcgtccccgttatcgcagagggcccctgcgtccacgccct
gccccggtcgctggagaggctgagaacaaagagaaccagcatgaggccggtgctgtaagt
cagcagccacttcgccgtgggtatcggcgcccatacaactaccggcgtcggcctcgtcca
cccaatacaccagctcaggatgggaaagagacaaaggtgaccgaaacacctgctgaaaat
cctgctccagtgactgagcagagtggtgctgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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