KEGG   Gallus gallus (chicken): 415933
Entry
415933            CDS       T01006                                 
Symbol
RAD54L2
Name
(RefSeq) helicase ARIP4
  KO
K10876  RAD54-like protein 2 [EC:5.6.2.-]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    415933 (RAD54L2)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     415933 (RAD54L2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII CdiA_C AAA_22
Other DBs
NCBI-GeneID: 415933
NCBI-ProteinID: NP_001280247
CGNC: 2355
Ensembl: ENSGALG00000003243
Position
12:complement(3080212..3119538)
AA seq 1473 aa
MSDESISGSDPDLDPDLEQEDMEEEEEEDEEAMEEDNDGDDEEDLLDESDQPQEAVFSSD
HVEHAEDGEWQRSTSTTSSQSERAERLLQNQHKSLASEDTKKKRAQKPSHMRRNIRKLLR
EDQLEAVTKAAQQEELERRKRLEQQRKDYPATIPTVSPEFLPEDIIFRAAEATQLPPQVL
AEEVICLDSTSSGSEDDTKGKNSIKDEVIELSSGEDDALQIVDSSDSGNEGEEDGSEESS
GSHVNDALNQSDALGQVIVNINHPPNEEDIFLAPQLAHAVKPHQIGGIRFLYDNLVESLE
RFKTSSGFGCILAHSMGLGKTIQVISFLDVLFRHTEAKTVLAIVPVNTLQNWLAEFNMWL
PAPENLPPDYNSKEVQPRTFKVHILNDEHKTTAARAKVVNDWVVEGGVLLMGYEMYRLLS
LKKSFATGRKKKTKKQTGPVIIDLDEEDRQQELLKGIEKALSRPGPDVVICDEGHRIKNC
HASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGSRQEFSNMFERPILNG
QCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHNVLKVQLPSKEEHVILVRLSKIQRALY
TEFMNRFRDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDDLGTA
STNSRCQPQAVKVKTESNALASPVGEATNSKFLQSVGFNPFQERANQVVTYEWAKDILCD
YQTGVLENSPKMVLLFHLVEESVKLGDKILVFSQSLSTLSVIEEFLAKRPMPNPPGSDGG
VHNWVRNISYYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNLIGANRVV
VFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDL
NPVLNFTRREVENLLHFVEEESDLAQLSLNPSKMKESVLQLACLKYPHLITKEPFQHESL
LIDRKEHKLTKAEKKAAKKSYEEEKRASVPYTRPSYAQYYPASDQSLTSIPAFSQRNWRP
ALKGEDKPVASVRPVQSTPIPMMPRHVPLGSAGSTSSSNPAVNFPINYLQRAGVLVQKIV
TTTDIVIPGTNTSTDVQARISAGESIHIIRGTKGTYIRTSDGRIFAIRTTGKPKGNEDRR
TAASGSQSSSLESASNGRHSASSPQLPSAEELTRPISPDSPEIISELQQYAEAAAARESR
HSSPSTTTAQSHPSRTDSAPGVAARGAEQRAGIHCVAASVSSALPAAGQHVDAHSVLDLR
GNKRKSSSPSTPEEQTRRQQKKRQLPSSVQPYEHGYPVSGGFAMPPVSLNHNLTHPFASQ
PGNSLYMGAGSSYYQLPNLLPDPHLVFPVTTDPLLTAGTASSSAATSATASVPSFMLNPS
LTGVLPSYSLPFTQSLLPEPRMFAPFPAPVLPSSLPRSMASAYPGYVSPHSGYPPGGFLR
SQVPQFEPQEVPEVGCSSNDEDKDDDVIEITGK
NT seq 4422 nt   +upstreamnt  +downstreamnt
atgtcggacgagtcaatctcagggagtgatccggacctggacccggacttggagcaggag
gatatggaagaggaggaggaggaagatgaggaggcgatggaggaggacaatgatggggat
gatgaggaggacttacttgatgagagtgaccaaccccaggaggccgtgttcagcagtgac
catgttgagcacgcagaggacggagaatggcagcgctctacttcaactacctcatcgcag
agtgagcgggcagagcgactcttgcagaaccagcacaagagcctggcctctgaggacacc
aaaaagaagagggctcagaaaccgtctcacatgcggagaaacataagaaagctattgcgt
gaggaccaactagaggccgtgacaaaggcagcccagcaggaagagttggagagaaggaag
cggctggagcagcaacggaaggattacccagccaccatcccaaccgtatcccccgagttt
cttcctgaggacatcattttcagagcagcagaggctacccagctcccccctcaggtcctt
gctgaggaagtgatctgcctagacagtaccagcagtggcagtgaagatgatactaaagga
aaaaacagcattaaagatgaagtgattgagctgagttcgggagaggatgatgccctccaa
attgtggacagcagtgactctggcaacgaaggggaggaagacggcagcgaagagagcagc
ggctctcatgtgaatgatgccttaaatcagtcagatgctctggggcaagtcattgtcaac
atcaaccatccaccaaatgaggaagatattttcctggctccccagcttgcacatgcagta
aaacctcatcagattggtgggatccgattcctgtatgacaacttggtcgagtccttggag
agatttaaaaccagcagtgggtttgggtgtattttagcacatagcatgggcctgggcaag
accatacaggtcatctctttcttggatgtactttttcggcacacggaggcaaagactgtt
cttgccattgtacctgtgaacacgcttcaaaactggctagcagaattcaacatgtggctc
ccagcacctgagaaccttcctcctgactataactccaaagaggtccagcctcgcaccttc
aaagtccacatcctgaatgatgaacacaagacaacggctgcacgtgcaaaggtggtgaat
gactgggtggtagagggcggtgtgctgctgatgggatatgagatgtaccgcctcctttct
ctgaagaagtcttttgccactggaaggaagaagaaaacaaagaagcaaactggccctgtc
attattgacttggatgaggaagaccgacagcaagagcttttgaaagggattgagaaagcg
ttgtctcgccctggcccagatgtggttatctgtgatgaggggcaccgcatcaagaactgc
catgccagcacctcgcaggccctgaagaacatccgctcccggcggcgggtggtgctgacc
ggctacccgctccagaacaacctcatcgagtactggtgcatggtagactttgtccgacct
gacttcctgggctcacggcaggaattcagcaacatgtttgaacgccccatcctgaatggg
cagtgtattgacagcacccctcaggatgtgcgtctcatgaggtatcgcagccatgtcctg
catagcctgctggagggctttgtgcagcggcgggggcacaatgtgctgaaggttcagctc
ccctctaaggaagaacatgtcattttggtacgtctgtcaaagatccagcgggccctttat
acggagttcatgaaccggttccgagatgcaggcaacagcggctggctgggactgaaccca
ctcaaagctttctgtgtctgctgtaagatctggaaccatcccgatgtgctgtatgaagct
ctgcagaaggagaatttagcaaacgagcaggacttggatgtggatgaccttggcacagca
agcactaattcccgctgccagcctcaagcagttaaagtcaaaacagagagtaatgctttg
gcatcaccagttggagaagccaccaacagcaagttcctccagagtgttggcttcaacccc
tttcaggagagagcaaatcaggttgttacgtacgagtgggccaaagacatcttgtgtgat
taccagacgggagtcttggaaaactcacccaaaatggtgttactgttccacctggttgag
gagagcgtgaagcttggagacaagatcttggtcttcagccagagcctgtccactttgtct
gtcattgaagagtttttggcaaagagaccaatgccaaatcctccaggctcagatggagga
gttcacaactgggtccgaaacatcagctattacagactggatggcagcacctctgcctcg
gaaagggaacgactgattaaccagttcaacgatcccagtaatgcttctgtttggctcttc
cttttgtccacacgtgctgggtgtttgggtgtcaacctcattggtgcgaacagagtggtg
gtgtttgatgcttcttggaacccgtgccacgatgcccaggctgtgtgcagagtgtaccgc
tacgggcagaagaagccgtgccacatttatagattggtgtctgattacaccctggagaag
aagatctatgaccgtcagatctccaagcagggcatgtcagatcgggtggtggatgacctg
aacccagtgctgaacttcacccgacgggaggtggagaatctgctgcattttgtggaagag
gaatccgatcttgctcagctctccctcaatccaagcaagatgaaggagtcagttctacag
ttagcctgtctcaagtatcctcacctcatcaccaaggagccttttcagcatgagtcactg
ctgattgaccggaaggagcacaagctgaccaaggcagagaagaaagcagccaagaagagc
tatgaggaggaaaagcgagcatccgtcccctacactcggccgtcctacgcacaatattac
ccagccagtgaccagagcctgacgagcatccctgccttcagccagaggaactggcgacca
gccctcaaaggcgaggacaagccggtggcaagtgtccgcccggttcaatctactcccatt
cctatgatgcctcggcatgtccccttgggcagtgcaggatcaacctcaagttccaaccct
gctgtcaacttccccatcaactatctacagcgagccggtgtccttgtgcagaagattgtc
acaaccacagatattgtgattccgggtacaaacacatccactgatgtacaggcgaggatc
agtgctggcgagagcatccacatcatccgagggacaaaagggacgtacatccggaccagc
gatgggcggatttttgctatccggaccactgggaagccaaagggcaacgaagaccgtcgg
acagctgcctcaggctcccagagctcttcgctggagtccgcaagcaacggcagacacagt
gcctcatccccgcagctccccagcgcggaggagctcactcggcccatatcccccgacagc
cccgaaatcatcagcgagctgcagcagtacgcggaggcggcggcggcccgggagtcccgg
cacagctcccccagcaccaccacggcacaaagccacccgtcccgcacggacagcgcgccc
ggcgtggcggctcgaggagctgagcagcgcgcggggattcactgcgtggctgcctccgtg
tcttcagccctgccagccgccgggcagcacgtcgatgcccactcggtgttggacttacgg
ggcaacaagcgcaagtccagctcgccgtcgaccccggaggagcaaacccgcaggcagcag
aagaagcgccagctgccgtcgtccgtgcagccgtacgaacacgggtaccccgtctccggt
gggttcgccatgcctcctgtctctttaaaccacaacctaacccatccatttgcctcccag
ccaggaaactccttgtacatgggcgctggctcctcttactaccagctgcccaatttactc
ccagaccctcatctggtgttccctgtgactactgaccctctgctgacagccggcaccgcc
agctcttctgctgctacctcagccaccgccagcgtcccctcattcatgctaaacccttct
ctgacgggggtgctgcccagttactcgcttcccttcacgcagtccctcctgcccgagccc
cggatgttcgctcctttcccagcccccgtcctgcctagcagccttcccaggagcatggca
tccgcctaccctggctacgtgtcccctcactcgggctacccgcccgggggcttccttcgc
tcccaggtgcctcagtttgaaccccaggaggtcccagaggtgggatgcagctctaatgac
gaggacaaagacgacgatgttatagagatcacagggaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (55)   

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