KEGG   Gallus gallus (chicken): 417287Help
Entry
417287            CDS       T01006                                 

Gene name
TRAF2
Definition
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Pathway
gga04010  MAPK signaling pathway
gga04141  Protein processing in endoplasmic reticulum
gga04210  Apoptosis
gga04217  Necroptosis
gga04621  NOD-like receptor signaling pathway
gga04622  RIG-I-like receptor signaling pathway
gga04920  Adipocytokine signaling pathway
gga05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    417287 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    417287 (TRAF2)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    417287 (TRAF2)
   04217 Necroptosis
    417287 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    417287 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    417287 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    417287 (TRAF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    417287 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    417287 (TRAF2)
   04121 Ubiquitin system [BR:gga04121]
    417287 (TRAF2)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     417287 (TRAF2)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     417287 (TRAF2)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    417287 (TRAF2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: TRAF_BIRC3_bd zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-C3HC4_4 Thioredoxin_3 zf-C3HC4_5 zf-RING_UBOX MATH zf_C2HC_14
Motif
Other DBs
NCBI-GeneID: 417287
NCBI-ProteinID: XP_015135104
CGNC: 6850
Ensembl: ENSGALG00000042838
Position
17
AA seq 601 aa AA seqDB search
MTAGVTHSVGGGGGLHERSGGVWPCRVWPCRPALSRPSPRAGSLPGGGAVRGGPRSTCPA
GGACARFRCGARTDGAAANSTPPGSLDLSQPGFAKEILGTKLEVKYLCSDCRNILRRPFQ
AQCGHRYCSYCLKKIISSGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAV
CINEGCTWKGTIKEYESCHEGNCPFLLIECQACRGVIPLNEKERHSERECPERTLNCKYC
KSLFYFPDIKAHDEVCPKFPLTCDGCGKKKIPREKFQDHVKNCGKCKVPCRFKVVGCAEM
VENEKLPEHESKCLAEHLYMLLSFVLSLKSGSGDLKHLPAIPSSQSSSPLLAANSLCPES
ELFKSLELLGRCDALEKKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQEQIETLSNK
VRQLERSIGLKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPA
FYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNR
EHIIDAFRPDVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLSG
L
NT seq 1806 nt NT seq  +upstreamnt  +downstreamnt
atgactgcaggggtgacacacagcgtggggggtggggggggtctccatgagaggagcggc
ggggtgtggccgtgccgggtgtggccgtgccgccccgccctcagccgtccgtcgccacgg
gcgggatcgttgccgggcggtggcgcagtgcggggcgggccgcgctccacgtgtccggcg
ggcggggcctgcgcgcgtttccggtgcggagcgcggacggacggggccgcagcaaactcg
actccgcccggctctctggacctgagccagcccgggtttgcgaaggagatcctgggaact
aagctggaggtgaagtacctctgctcggactgcaggaacatattgaggcggcccttccag
gcacagtgcgggcatcgctactgctcctattgcttgaagaaaatcataagttctggacct
cagaagtgtgcgagctgcattcaggaaggaatatacgaagaaggaatttctattttggaa
acgagctctgctttcccagacaacgcagctcgtcgggaggtggaaagtctgcccgctgtc
tgtattaatgagggctgcacgtggaaggggactattaaagaatatgagagctgccatgag
gggaactgcccgttcctgctgattgagtgccaggcatgcagaggtgtgatccctctgaat
gagaaggagcgccactctgagcgggagtgccctgagagaaccctcaactgcaaatactgc
aaatcacttttctacttccctgatattaaggctcacgacgaggtctgcccaaaatttcca
ttgacttgtgatggctgcgggaagaagaagatccccagagagaagtttcaggaccacgtg
aagaactgcggcaaatgcaaagtgccttgcagattcaaggttgtcggctgtgctgagatg
gtggaaaatgaaaagctaccagaacacgaaagcaagtgcctggcagagcatctatacatg
ctgctgagttttgtgctcagcctcaagagtggatctggagacctgaagcaccttcctgcc
attccctcatcacagagcagctccccgctgctggcagcaaactccctgtgcccggagtcg
gagctcttcaaatccctggagctcttgggaaggtgtgacgccctggagaagaaaacagtg
acctttgagaacatcgtctgcgtgctcaatagagaggtagaaagggtatctctgacagct
gaagcgtacagccggcagcatcgattagaccaggagcagatcgagacgctgagtaacaag
gttcggcagctggaaaggagcattgggctgaaagacctggccatggctgagatggaggag
aagatccgcaacatggaggcttccacctacgatggtgttttcatctggaagataacagaa
tttgccaggaagcgccaggaggcgatcacgggccgctctccggcgatcttctctccagct
ttctacacgagcaagtatggctacaagatgtgtctgcgcgtttacctgaacggggatggc
accgggcgtgggacccatctgtccctgttcttcgtggtgatgaaaggacccaacgatgcg
ctcctgcgttggcccttcaaccagaaggtgaccctgatgctcttggatcagaacaaccgg
gagcacatcattgatgcgttccgacccgacgtgacctcctcctcctttcagcgcccggtc
acggaaatgaacattgccagcggctgcccgctgttctgccccgtctccgtgatggaagcc
aagaactcctacgtccgcgatgacgccatcttcattaaagccatcgttgacctctcgggc
ctttaa

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