KEGG   Gallus gallus (chicken): 418010
Entry
418010            CDS       T01006                                 
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    418010 (TNRC6B)
   03036 Chromosome and associated proteins [BR:gga03036]
    418010 (TNRC6B)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     418010 (TNRC6B)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    418010 (TNRC6B)
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook RRM_occluded RRM_1
Other DBs
NCBI-GeneID: 418010
NCBI-ProteinID: XP_004937779
CGNC: 9134
Ensembl: ENSGALG00000012050
Position
1:complement(50107385..50247891)
AA seq 1893 aa
MQTDEGEILEEGSPKMEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKEDKK
KKESAQKVTDQKTKVPEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPPSAA
RYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPPTAPGANPNNAQPVTGAL
LQSDSGTATDSTIGGAAASNYANSTWGPGASSSSGTNANPTHIWDKVIVDGSDMEEWPCI
ASKDAESSSENTTDNNSASNPGLEKNTLPGSTTSNKGKGSQCQSGSAGNECNLGAWKSDP
KAKSVQSSNPATESNSGLSNWRNLTGQDRIGSGSGFSNFNPNSNPSAWPALVQEGNSRKG
TSESDSGSSNAQISTVGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSLNLS
SPNPMENKGMPFEMGLGNPSRSTDTPSQSTGERKTGSVGSWGTARGSSGTDTVSGQSNSG
NHGNNGKDREDSWKGASVQKPNGSRSDSWDNNNRSTGGGSWNFGPQHANESKWGEGNKLT
SGVSQGEWKQLSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGRSSS
SAGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGW
GQTQIKQDTVWDIEEMPRSEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQIKSGWGEL
STPTEWKDPKNTGGWNDYKNPNSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQPNQGWSS
GKNGWGEEVDQAKNSNWESAGNKPASGWGEGGQNEIGTWGNGANTGSASKGGWDDCKRNS
TWNETGRQPNSWNKQQQQQQQQQQETSGSWGPPPQTPSNGRPPNPNWNSGPQPAAPKDEE
PSGWEEPSPQSISRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTPMTS
KSQASVWSKSTPPAPDNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAMKSSS
KSMQDGWGESDGPVTGTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKTQMKCS
LKGGNSDSWMNPISKQFSNMGLLSQTEDIPGNKMDLSVGGLPDKKFEVDKRAMNLGDFND
IMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKLSPS
GSTLSNVGLGAIGSGLSPQNYAARQGGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRAQVP
PQFLSPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQ
QQQQQLLQSQRKLSQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPSHPVGPKPHIDSMV
PNPLNVGLSDLQTKGQIPGYGSGFGSSSMDYGMVGGKEAGTESRFKQWTMMEGLPSVASQ
DANMHKNGAIVPPGKARGGSPYNQFDIIQGDPLGGHAGPAGDSWLPAKSPPTNKIGSKSS
NASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSS
LNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWKNHISS
RNTTGLPRPPPGLTNPKPSSPWNSTAPRSVRGWGAQDSRLASGEKDHLITPLIRPEECAF
YSTNGLEERKLQLPASTWSDGSSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLN
LTQGTALIRYNTKQEAAKAQTALHMCVLGNTTILAEFATDEEVSRFLTQAQPPTPAATPS
APTAGWQSLETGQNQTDPVGPALNLFGGSTGLGQWSSGGGGSSGGDLTGASLWGPPNYSS
SLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq 5682 nt   +upstreamnt  +downstreamnt
atgcaaactgatgagggagaaatactggaggaaggcagtcccaagatggaacatgaggat
tttgtaatggaggggcatggcaagactccacctcctggtgaagaaaacaaacaagagaag
gagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaggaggataagaaa
aagaaggaatctgctcagaaggtcacagatcaaaaaaccaaagtgcccgaagtgacgaaa
ccaagtttaagccaaccagtggctgccagcccaattggcaactctccatcgccaccagtc
aatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcc
cgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgtta
ctgaaacgtgggcagccccctccaccatcctgtatgctccttgggggtggagcagggcct
cctccccctacagcaccaggagcaaacccaaacaacgcacaaccagtgacaggagcactg
ctgcagagcgacagtgggactgcaacagattcaacaattggaggtgctgctgcttcaaat
tatgcaaattccacttggggtcctggagcctcctccagcagcggcaccaacgccaaccca
actcacatctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtatc
gccagcaaagatgctgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaac
cctggcttggagaagaacactctgccaggaagcaccactagtaacaaaggaaaaggaagc
cagtgccagtctggaagcgctggaaatgaatgtaatcttggggcctggaaatctgatccc
aaggctaaatctgttcaatcttccaaccctgctaccgagagtaacagtggactaagtaat
tggaggaacttgactggacaagatagaattggttctggttctggcttcagcaactttaac
ccaaatagcaacccgtctgcttggccagcactggtccaagagggcaattctaggaaaggg
acttcggaatctgatagtggtagctccaatgcacagattagcacagtaggtcagacctct
agggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctctggcagagaacag
gctcaaattcataacactgatggaccaaaaaatggaaacactaactccttgaacttaagt
tcaccaaaccctatggagaataagggaatgccctttgaaatgggcttggggaacccttcc
aggagcactgacaccccttcacaaagcactggagaaagaaagactgggagtgttggatct
tggggtacagctagggggtcttctggaactgacacagtctctggacagagcaattctgga
aaccatgggaacaatggaaaggatagggaggactcctggaaaggagcttctgttcaaaaa
cctaatgggtcaagaagcgattcttgggataacaataaccggtctacgggtggtgggtct
tggaactttggccctcagcatgcaaatgaaagcaaatggggtgaagggaacaaattaaca
tctggggtctctcagggagaatggaaacagctgtctgggtctgatgaactgaagattgga
gaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaaaggc
caccctcttcctgaaaaccaaggcaattcccaggctccctgttggggaagatcttccagc
tctgcaggaagtgaggttggaggtcaaagcactggaagcaaccacaaagcaggaagtagt
gacagtcacaattctggacgccgatcatacaggcctacgcatcctgattgccaggcagtc
ttgcagactttgctgagcaggactgatttggacccccgagtgctttcaaacactggctgg
ggccaaactcaaattaagcaagataccgtatgggatattgaagagatgccacggtccgag
gggaagtctgataaaggaactgaggggtgggagagctctgccacacagacaaagaactca
gggggctggggcgatgtacccagccaaagcaatcaaatcaagtctggatggggtgagctc
tcaaccccaacagaatggaaggaccccaaaaatactggaggatggaatgactataagaac
cccaattcgtctaattggggagggggaagacaagaagagaaatcgtcatcttcttggaat
gacagctctagtaaggatcaggggtggggtggacggcagcctaatcaaggatggtcttct
ggaaagaatggttggggagaggaagttgaccaagcaaaaaacagcaactgggaaagtgcg
ggaaataagccagcatctggttggggtgaaggtgggcaaaatgagattggaacttggggt
aacggtgcaaatacaggctctgcttcaaagggtggttgggatgattgtaaaagaaattca
acgtggaacgagacgggtcgacagcccaactcctggaacaagcagcagcagcagcaacag
cagcaacagcaagagacttctggttcctggggtccaccgccacaaactccaagtaatggg
cgacctccaaacccaaactggaacagcggaccacaaccagctgcccccaaagacgaggag
cctagtggctgggaagaaccttctccacagtcaatcagtcgaaaaatggatattgatgat
ggcacttcagcgtggggagatcctagcagttataactacaagaatgtgaacctgtgggac
aagaactcacaagggggacaggccccacgggaacagagcctgcctactccaatgactagc
aaatcacaagcatcagtctggagcaaaagcactccacctgctccagataatggtacgtcc
gcctggggtgagccaaatgaaaccagtcccgggtggggtgaagtagatgatacaggagca
tcgacaacaggctgggggaatgcaccttccaacgccccgaatgccatgaaatctagttct
aaatctatgcaagatggctggggagagagtgatgggccagtgacaggaacacgtcattcc
agctgggaagaggaggaggagggaggagtctggaacacagcaggctctcagggaagcagt
tcctcccacaactcaacaagctgggggcaaggaggaaagaaaacgcagatgaagtgctcg
ttaaaaggaggaaatagtgattcatggatgaaccctatatccaagcagttttcaaatatg
ggcttgctaagtcaaactgaggacattccaggcaataagatggacttgtctgtaggtggt
ctcccagataagaagtttgaggtagataaacgagccatgaatctcggggattttaatgac
ataatgagaaaggatcgatctgggttccgtccacctaattccaaagacatgggaaccaca
gatagtgggccttattttgagaagctgactttgcctttctccaatcaagatgggtgcctt
ggggatgaggctccctgctctcccttctccccttctcccagctacaagctgtctccctct
ggttccacactatccaacgtcggccttggagcaatcggctcagggctcagtccccaaaac
tacgctgctagacaaggtggcaatcatggtttgtttggaaacagcacagcacaatcgagg
ggcatgcacacaccagtgcagccactaaatccttcccccaatatccgggcgcaagtgcct
ccccaatttctttctccccaggtttcggcctccatgctcaaacagttccccaacagtggc
ttgaatccaggtcttttcaatgtggggccccagctttctccacaacagattgccatgctg
agccagcttccacagattccccagtttcaattagcatgtcagctcctccttcagcagcag
cagcagcagcagcagctgttacagagccagaggaagttatctcaagctgtgcgacagcag
caggagcaacagattgctcgtatggtgagtgccctccagcagcagcagcagaggcagcct
ggcatgaagcattcaccatcccaccctgttgggcctaagccacatatagacagcatggta
cccaatcctttgaatgtgggtctttcagatttacagaccaaaggacaaatacctggatac
ggttcaggctttggctcaagcagcatggattatggcatggtgggagggaaagaagctgga
acagaatcccgctttaaacagtggactatgatggaagggctgccctctgtggcttcacaa
gatgccaatatgcacaaaaatggtgcaatagtgccccctggaaaggctcgcggaggatcg
ccctacaaccagttcgacataattcagggcgacccactaggtggccatgcaggccctgct
ggtgatagttggttacctgccaaatctccaccgacaaacaagatcggaagcaaatccagc
aacgccagctggcctccagagttccaaccaggagtgccatggaaaggtatacaaaacatt
gaccctgaatctgacccctacgtgacccctggaagtgtgctgggggggacagccacatct
cccattgtagatactgaccaccaacttctgcgggacaacaccacagggtctaattcttcc
ctcaacacctcgctgccttcacctggtgcctggccctacagtgcctctgacaattccttc
accaacgttcatagcacttcagcaaaattcagtgattacaaatcaacatggtccccagat
cccataggacacaatcccactcatctctccaacaagatgtggaaaaaccatatttcctca
aggaacactacagggctgcctcgcccgcctcctggcctgaccaaccccaaaccatcatct
ccatggaacagcacagcaccccgatcggtcaggggctggggggcacaggactcaaggctt
gcctctggtgagaaggatcatctgataacgccattgatcagacctgaggagtgtgcattt
tacagcactaatggtttggaggagagaaagttgcagttgcctgcatctacttggagtgat
ggtagctcagttcgtcctagctactggctggttcttcacaatctcactccacagatcgat
gggtcaaccttgaggacgatctgcatgcagcatggtccactgctgacattccatctgaac
ctgacccagggcaccgctctcatccgatacaacaccaaacaggaggcggccaaggcccag
actgcactgcacatgtgtgtgttgggaaacactaccatccttgctgagtttgccacagat
gaagaggttagtcgctttttgacacaagctcagccccctacacctgcagcaaccccaagt
gcacccacggcaggctggcaatccctggagacaggacagaaccagacagatccagttgga
cctgctttgaatctctttggtgggtcaacagggcttgggcagtggagcagtggtggcggc
ggcagcagtgggggtgatctcactggcgcttcgttgtgggggcccccaaactattcttca
agcttgtggggggtcccaagcgtagaggatccacacagaatgggcagccctgctccctta
ctacctggagaccttctgggaggagggtcggattcaatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (58)   

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