KEGG   Gallus gallus (chicken): 418872
Entry
418872            CDS       T01006                                 
Symbol
TRIM13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13
  KO
K12003  tripartite motif-containing protein 13 [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    418872 (TRIM13)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     418872 (TRIM13)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    418872 (TRIM13)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4_2 Herpes_IE2_3 MAP65_ASE1 U-box zf-Nse
Other DBs
NCBI-GeneID: 418872
NCBI-ProteinID: XP_004938778
CGNC: 12772
Ensembl: ENSGALG00000017011
Position
1:170686981..170696398
AA seq 416 aa
MTLVLRDMMELLEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILDGNVRNVLWRPSPF
KCPTCRKETPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQL
ICGVCATRGDHTKHVFCSIEEAYSQEKRAFETLFQGFETWRCGDALSRLDTLETSKRKAL
QMLTKDSDKVKEFFDKLQHTLEQKRNEILSDFETMKLAVMQAYDPEINKLNSILQEQRMA
FNIAEAFKDVSEPIVFLQQMQEFREKIRVLRETPLPCSNVDITPTMKSFDTSQWNGIKLV
DVDKLSLPQENNGLKLKIPSVFSRRFIVASLICLLVFAITRMSFVESVVDNFQCWKSQFF
TISLSYLADTVEIADHAVFYWEQMTDGASLLSEKCKNYTLVVLDNVAQFVCKYKLL
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgaccttagtcctcagggacatgatggagctcctagaagaagatctcacctgtcccatt
tgctgtagcctgtttgatgaccctcgtgtcctgccctgctcacacaacttctgcagaaag
tgtctggagggaatactggatggaaatgtgcggaacgtgctgtggaggccatcccctttc
aagtgtcccacgtgcaggaaggaaactcctgttactggagtcaacagcttacaagtcaac
tattccctgaagggtatcgtggagaagtacaacaaaatcaaagtaactccaaaaatgccc
gtgtgcaaagtgcacagcgggcaacccctgaacattttttgccggacagacatgcagctg
atctgtggggtttgtgccacccgtggcgaccatacaaagcatgtgttctgttctattgag
gaagcttattcccaggagaaacgggcttttgaaaccctgtttcagggctttgaaacgtgg
cgttgtggagatgcgctgtctcggctggataccttggaaaccagtaagcggaaagctctg
cagatgctgaccaaggattctgacaaggtgaaagaattctttgataaactgcagcacacg
ctggagcagaagcgaaacgagattctctctgactttgagaccatgaagcttgcagtgatg
caggcctacgatccggagatcaataaactgaactcgattctgcaggagcagcggatggct
tttaacattgcagaggccttcaaagacgtgtctgaacccattgtatttctgcaacagatg
caggagttcagggaaaaaatcagggtgctcagagaaacccctttaccttgttccaatgtg
gacatcacccctacaatgaagagctttgataccagccagtggaatggaatcaaattggtt
gatgtggacaaactttcattacctcaggaaaacaacggtctgaaattgaagattccctca
gtcttttcacgcagatttatagtagcctctctcatttgcttgctcgtttttgctatcacc
agaatgtcctttgtggagtctgtggttgacaacttccagtgctggaaatctcagttcttt
accattagcttgtcctatctggcagatacggtggagatagctgatcatgcagtcttttac
tgggaacagatgactgatggagcttcacttctgagcgagaagtgtaaaaactatacgttg
gttgtactggataatgttgcacagtttgtgtgcaagtacaaactgttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (12)   
   Pfam (12)   
All databases (48)   

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