KEGG   Gallus gallus (chicken): 419485
Entry
419485            CDS       T01006                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 precursor
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
gga  Gallus gallus (chicken)
Pathway
gga00310  Lysine degradation
gga01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gga00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    419485 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gga04147]
    419485 (PLOD1)
Enzymes [BR:gga01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     419485 (PLOD1)
Exosome [BR:gga04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   419485 (PLOD1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 419485
NCBI-ProteinID: NP_001005618
CGNC: 51011
Ensembl: ENSGALG00000004531
UniProt: P24802
Position
21:complement(5515436..5532562)
AA seq 730 aa
MVPPAVLLPWVVLPLLGVQGGSGSKQEENLLVLTVATKQTEGFRRFRRSAQFFNYKIQVL
GLDEEWKGGDDKKPAGGGQKVRLLKSALKQHADKEDLVILFIESYDVLFASGPTELLKKF
KQAKSKVVFSAENYIYPDRKLEAKYPPVRDGKRFLGSGGFIGYAPNLKKLVEEWKGKDDD
SDQLFYTKIFLDPEKRENINISLDHRSRIFQNLNGALDEVVLKFENARVRARNLLYDTLP
VIIHGNGPTKLQLNYLGNYIPQIWTFETGCTVCDEGLRSLTGIKDEALPMILIGIFIEQP
TPFLSQFFLRLRNLHYPKQRIQIFIHNHEEHHSMQVDSFVKEHSKEYLAMKVIGPDDEVE
NAEARNLGMDLCRKDPDCDYYFSLDAEVVLKNTETLRILIEQNKSVIAPLVSRHEKLWSN
FWGALSPDGYYARSEDYVDIVQRRRVGLWNVPYISSVYMVKGKVLRSELDEGDLFHGGKL
DADMAFCHNVRNQGVFMYLTNRHQFGHILSLENYQTTHLHNDLWQIFSNPEDWREKYIHE
NYTAALKGKLVEMPCPDVYWFPIFTDTACDELVEEMEHYGKWSTGDNTDSRIQGGYENVP
TIDIHMNQIGFEREWYKFLLDYIAPITEKLYPGYYTKTQFELAFVVRYKPDEQPSLMPHH
DASTFTINIALNRVGIDYEGGGCRFLRYNCSIRAPRKGWTLMHPGRLTHYHEGLPTTKGT
RYIAVSFIDP
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggtgcccccggcggtgctgctgccctgggtggtgctgccgctgctcggggtgcagggt
ggcagcggctccaagcaggaagaaaacctgctggttctgactgttgccaccaagcagacc
gagggatttcgacgctttagaagatcagcccaattcttcaactacaaaatccaggtgctt
gggctggatgaggagtggaagggtggagatgacaagaagccagcgggaggtgggcagaag
gtccgtctcttgaaatcagctttgaagcagcatgcagataaggaagacttggtcatcctt
ttcattgaaagctatgatgtactctttgcatcgggccccacggaactgctgaagaagttc
aaacaagccaagagcaaggtggtcttctcagcagagaattacatctatcctgacagaaag
ttggaagccaagtaccctccggtgcgagatggaaagcgcttcctgggttctggaggcttc
ataggttatgctccaaacctgaaaaaacttgtagaggagtggaaaggaaaggatgatgac
agtgaccagctcttctacacgaagatctttttggatccagaaaaaagagaaaatatcaac
atcagtctagaccatagaagtcggatcttccaaaacctaaatggagcattagatgaggtg
gttctgaagtttgaaaatgcacgagtgagagcaagaaacttgttatatgacactctgcct
gtaataattcatggaaatggacccaccaagctgcagctgaactacttgggaaactacatt
cctcaaatatggacatttgagactggctgtactgtgtgtgacgaaggtctgcgcagcctc
acaggtattaaggatgaagctctgccaatgattctgatcggtattttcatcgagcagccc
accccgtttctctcccagtttttcttgcggcttcgtaatctccattacccaaagcaacga
attcaaatcttcattcacaaccatgaagaacatcactcgatgcaagtggactcttttgtt
aaggagcacagcaaagaatatcttgctatgaaagtgattggaccagatgatgaggtggag
aatgctgaggcgcgtaacttgggcatggatttgtgcagaaaggatcctgactgtgattat
tattttagtctggatgctgaagtagttctgaagaacacagagacactaaggattctcatt
gaacagaacaagtcagtgattgcccccctggtaagtcgtcatgagaagctgtggtcaaat
ttctggggagcgctgagccctgatgggtattatgcccgctcagaagattacgtggatatt
gttcaaaggaggagggttgggctctggaatgttccctacatcagcagtgtttacatggtg
aaaggtaaagtcctgcgatcggagctcgacgagggagatctcttccacggtggcaagctg
gatgctgacatggctttctgccacaatgtgcggaatcagggagtcttcatgtacttgaca
aatagacatcagtttggacacatactgtctctggagaattaccaaacaactcacctccac
aatgacctctggcaaatattcagcaaccctgaggactggagagaaaagtacatccatgaa
aactacacagcagctctgaaagggaaattggtagaaatgccttgcccggatgtgtactgg
ttccccatattcactgacactgcctgtgatgagctggtggaagaaatggagcattatggc
aagtggtccacaggtgacaatacggacagtagaatacaaggaggatatgagaatgtccca
actattgatatccacatgaaccaaattggctttgaaagagaatggtataagtttcttctg
gactatattgcacccatcacagagaaactgtacccaggatattataccaagactcagttt
gaactagcctttgtggtccgctacaaacctgatgagcagccttctctaatgccccatcat
gatgcttccacctttaccattaacattgctctgaacagggttggaatagactatgaggga
ggaggctgccggtttttgcgctacaactgctcaattcgagctccacggaaagggtggact
ctcatgcatccgggacgcctcacccactaccatgaaggtcttccaaccaccaaaggaacc
cgttatattgcagtgtcttttattgacccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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