KEGG   Gallus gallus (chicken): 420103
Entry
420103            CDS       T01006                                 

Gene name
POLR2E
Definition
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
gga  Gallus gallus (chicken)
Pathway
gga03020  RNA polymerase
gga04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    420103 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    420103 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    420103 (POLR2E)
   03400 DNA repair and recombination proteins [BR:gga03400]
    420103 (POLR2E)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     420103 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     420103 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     420103 (POLR2E)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      420103 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 420103
NCBI-ProteinID: XP_418224
CGNC: 1864
Ensembl: ENSGALG00000002591
UniProt: F1NHV9
Position
28
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctgtggaagatccgaaagaccatcatgcagctg
tgccacgaccgcggctatttggtgacgcaggacgagctggatcagacgctggaggagttc
aaggcgcagttcggggacaaacccagcgagggccgcccgcgccgcaccgacctcaccgtg
ttggtggcgcacaacgacgacccgaccgaccaaatgttcgtcttcttccccgaggagccc
aaagtgggcatcaaaaccatcaagatgtactgccagcgcatgcaggaggagaacatcacg
cgtgcgctgattgtggtgcagcagggaatgaccccctcggccaaacagtccctggtcgat
atggctcccaaatacatcctggagcagtttctgcagcaggagctcctgatcaacatcacg
gaacacgagttggtcccagagcacgttgtcatgacaaaagaagaagtgacggagctgctg
gccagatataaactgagggagaaccaactccccaggatccaggctggggatcccgtggcc
cgatactttgggataaagcgaggccaggtggtgaagatcataagacccagtgagaccgcg
ggccgttacatcacctacaggctggtgcagtga

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