KEGG   Gallus gallus (chicken): 420560
Entry
420560            CDS       T01006                                 
Symbol
VPS50
Name
(RefSeq) syndetin
  KO
K23288  syndetin
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gga04131]
    420560 (VPS50)
Membrane trafficking [BR:gga04131]
 Protein recycling
  Others
   EARP complex
    420560 (VPS50)
SSDB
Motif
Pfam: Vps54_N Syndetin_C
Other DBs
NCBI-GeneID: 420560
NCBI-ProteinID: NP_001012872
CGNC: 7228
Ensembl: ENSGALG00000009500
UniProt: Q5ZKV9
Position
2:22950158..23019350
AA seq 949 aa
MQKIKSLMTRQGLRSPQESVHDLSPIENLRFPTKEELRESWEEPTDPQAQQEIINSIEEV
YFSNDAFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAELERVTSLQNGLQLAAVICAD
GRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPG
AIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQ
AYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHITS
DSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAATVSSVSDGSSVVGTEENSFDRSY
VKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVISRLMQVGEEFCGSKSE
VLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFDILQLHEFKFMVQSRSP
SVSPSKQPASAISTTVTLFEQYCNGGNPFEIQADSKDDETEDVLASNGYESDEQEKSAYQ
EYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKKSDYSLNKGNAPILTNTTLNVV
RLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDTFESTGLGLSSSRLRTT
LNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVLTSGSSLYGLAERVVATES
LVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTANELRKPVYWIVAAKAIDYEQML
LLMANVKWDVKEIMSQHNVYVDSLLKEFEEFNRRLNEVSKRVRIPLIVSNILWEHCMRLA
NRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTEN
DMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgcagaagatcaagtcgctgatgacccggcagggtctgagaagtcctcaggagagtgtt
catgacctcagtcctattgaaaacctccggtttcctactaaggaggaactcagagaatca
tgggaagaaccaactgatcctcaagctcagcaagaaataattaatagcattgaagaagtt
tatttttccaatgatgcctttgatattgtgaagtacgaattagagaggcttcctcctgta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgaa
ctggaacgcgttacgtcgttgcagaacggccttcagttagcagctgttatttgtgcagat
ggaagaagacacctgaatatcgctaaggaaggcttcacacaaaccagtttgggactgctt
gcgaatcaaaggaagagacagttgcttattggactactgaagtctctgaggacaataaaa
acactgcaaagaactgatgtgcggttaagtgagatgctggaggaagaggactatccagga
gctattcaactgtgtttggaatgccagaaagctgccagcactttcaaacactacagttgt
ataagcgagttgaattcaaagctgcaagatactttggaacaaatagaggaacaattggat
gtagcactctccaagatatgtaagaactttgatatcaatcattatacaaaggttcagcag
gcttacaggctgcttgggaaaacacagacagcaatggaccaattgcacatgcacttcact
caagctattcacaacactgtgtttcaagtagtgcttggatatgtggagctttgtgcagga
aacacagacaccaagtttcagaagttacaatacaaagacctctgtacacatattacatca
gacagctacattccatgtcttgctgatctctgcaaagccctttgggaagtcatgctcagc
tattaccgaacaatgcagtggcatgagaatcatgatcaagatgaggcagcaactgtgtct
tctgtttcagatggcagcagtgtggttggaactgaggagaacagttttgaccgcagctat
gtaaaaaagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtg
aaaacataccttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgta
cttgatgttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaa
gttttgcaagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacc
cgtcttgaagaattaagaatgtttttggagaatgagacctgggaactttgccctgttaaa
tcaagctttgacattttacagcttcatgaatttaaattcatggtgcagtcacgttcccca
tctgtgtcaccaagtaagcagcctgcttcagcaatttcaacgacggtaactttatttgag
cagtactgtaatggaggaaacccatttgaaattcaggctgacagcaaagacgatgagaca
gaagatgtgttagcttccaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaa
gagtatgatagtgacagcgatgttcctgaagagttgaaaagagactatgtagatgagcag
acaggagatgcccctatgaagagtgtttctcgagaaactctgaggagcagaaagaaatcg
gattatagcctcaataaagggaatgcacctatcctgacaaacactacactcaatgtagta
aggcttgttgggaagtatatgcagatgatgaacattctcaagccaattgcatttgatgtc
atccacttcatgtcccagctcttcgactactatctgtatgcagtctatacattttttggc
cgaaatgacacgtttgaatcgacaggattgggcctcagtagtagcagattacgcaccacg
ctgaacagaatccaggagagcctcattgatctagaggtctctgctgatcccacaggaact
ctcacagctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtc
gttttgacatctggcagttcactctatggtttggcagagagagtggtagccacggaatcc
ttggtttttctggctgagcagtttgagtttcttcagcctcatcttgatgcagtgatgcca
gctgccaagaagccttttcttcagcagttctattctcagactgtgtcaactgccaatgaa
ctacgcaaaccagtttattggattgttgctgctaaagccattgattatgaacagatgttg
cttctcatggctaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatac
gtagactctcttttaaaggaatttgaagaatttaacagaaggttgaatgaggtatctaag
agagtccgtattccactaatagtatcaaatatactttgggagcactgcatgcgcttggcc
aatagaactcttgtagaaggttatgctaatgtgaagaaatgcagcaatgaaggacgtgcc
ttgatgcaacttgactttcaacagttcttaatgaaactagaaaagttaacagacattaga
cctattccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaat
gacatggagcgttggataaaagaacacagggaatattccactaagcacttgacaaatctg
gtgaatgtttgtctggggtctcacatcaacaagaaggcaagacagaagctgctagctgct
attgatgacatagacaggcctaaaagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system