KEGG   Gallus gallus (chicken): 421086
Entry
421086            CDS       T01006                                 
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X3
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
gga  Gallus gallus (chicken)
Pathway
gga03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    421086 (TAF4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    421086 (TAF4B)
   03036 Chromosome and associated proteins [BR:gga03036]
    421086 (TAF4B)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     421086 (TAF4B)
   Coactivators
    SAGA/TFTC/STAGA complex
     421086 (TAF4B)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     421086 (TAF4B)
SSDB
Motif
Pfam: TAF4 TAFH
Other DBs
NCBI-GeneID: 421086
NCBI-ProteinID: XP_015133479
CGNC: 11252
Ensembl: ENSGALG00000015122
Position
2:104150697..104224448
AA seq 762 aa
MEQVFFWICNCLVNLPWQGTVLIRSSNGQLMLVSQQAIARAQPQPQNNTSVRLSVPTSTP
AVRICAVQNSGTQLIKKAVPTPLKTLSQTTNAVTSTVQSPAVIQPAAATASVTAVTAVKP
LSTGTPVKLPVTGPPAQSISQKAVSVKAEGTTVAQTSTSTEMLENVKKCKNFLATLIKLA
SGSGPQATEMGQNVKNLVQNLLEAKIEPEEFTKKLYVELKSSPQPYLVPFLKKSMLALRQ
LMPNAQSFIQQCMQQPAPTQEAVSTCTSALTPSMAVATSPVAANSLPVIKPVSASTTVTA
APVIKPVLSSASVTASLQAMKPVPASAVVTASLRPAPSVLTTTVSTSGLTAIQTVKPVFT
SAVATSSLQSVKPVLVSTVASSAATPLQPLKPVMGTPISIKISQPNSIVTQPVATQQVVK
VKQLVVQQPSGTIVKQVSTLPQSSTLTLQTPVEKRMPLNTLVQTNQFPAGSVLKQVTLPG
NKILSLQASPIQKTKIKENGTTSFSRDEDDINDVTSMAGVSITEESACILATNSELIGTV
TRSCADEPFLLSEALQKKILNIGKRHDIMELNSDVVNLISHATQERLRGLLEKLTVIAQH
RVSTHKGSETYIVSSDTRAQLKFLEKLDHLEKQRKDEEEREMLLRAAKSRSNKEDPEHLR
LKQKVKEMQQLELAQMQQREANLTALAAIGPRKKRPLDSSNAGSGTEGLNSNGIAPGSSN
FSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLTLYRALLK
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggaacaagtgtttttctggatatgcaactgtcttgtgaatctgccctggcaaggaact
gttcttatcagaagcagtaatggtcaactgatgctagtatctcaacaagcaatagcacga
gcacagcctcaaccacaaaataacacaagtgtacgactgtctgtacctaccagcacacct
gcggtcagaatatgtgctgtacagaactctggcacccagttaataaagaaagcagtacct
actcctttgaaaacattatctcaaacaacaaatgctgtgacttctactgttcagtcacct
gctgttatacagccagcagctgcaacagctagtgttactgcagttactgctgtaaagcct
ttgagtactggaacacctgtaaaacttccagttacaggaccacctgcacaatccatctcc
caaaaggcagtctctgtgaaagcagagggcacaacagtagcacagaccagcacttctaca
gagatgctagagaatgtgaagaaatgcaagaatttccttgctacgctaataaaattggca
tctggtagtggacctcaagccactgagatggggcagaatgtgaagaatctggtgcaaaat
ttattggaagcaaaaattgaaccagaagaatttacaaagaaactgtacgtagagctcaag
tcttctccacagccgtatttagttccttttctcaagaaaagcatgcttgccttacggcag
ctaatgccaaatgctcagagttttatccagcagtgtatgcagcagcctgctccgacccaa
gaagctgtttcaacttgtacctctgcactaactccttccatggcagtagcaacctcacct
gtagcagccaattctcttcctgttataaaaccagtgtctgcctccacgacagtcacagcc
gctcctgttatcaaaccagtcctttccagtgcatcagtgacagcgtctctgcaggctatg
aagcctgttcctgcctctgcagtggtgacagcctctcttcgtcctgcaccttctgtcctc
accacaacagtatcaacatcagggctcactgctatccaaactgtaaagccagtcttcacc
tctgcagtagcaacatcatctctccagtctgtaaagccagtgctcgtctccacagtggca
tcctcagcagcaacccctcttcagcctttgaaacctgtcatgggcacccccatcagtatt
aaaatctcacagcctaactccatcgttacgcagccagtggccacgcagcaggtggttaaa
gtgaaacagttggtagtccaacaaccatcaggaaccattgtaaagcaagtatccacactt
ccacagtcctcaacactgactcttcagacacctgttgagaagaggatgccgctgaatacg
cttgttcaaacaaaccaatttcctgctggctctgttctgaagcaagttaccctgccagga
aataaaattctgtcgcttcaagcgtcccctattcagaaaactaaaataaaagagaatgga
acaacatccttcagtagagatgaagatgacataaatgatgtgacttccatggctggagtc
agcattactgaagagagtgcatgcattctggcaacaaattcagagctcattggtactgtg
acccgctcttgtgcagatgaacctttcctgctttcagaagcacttcagaagaagattttg
aatatcggtaaaaggcatgacattatggaacttaactctgatgttgtgaacttgatctcc
catgctacacaggagagattacgagggctcctagaaaaactaactgtaattgctcagcac
agagtatcaacccataaggggagtgagacatacattgtatctagtgataccagagcacag
ctaaaatttctggagaagcttgatcacctagaaaagcaaagaaaggatgaagaggaacgt
gaaatgttgctacgagcagccaagagccgttccaataaagaagatccagagcatctgcgt
ttaaagcagaaagtgaaagagatgcaacagttggaattagcacaaatgcaacaaagagaa
gctaacctcacagctttggcagccattggaccaaggaagaagagaccgttggattcatca
aatgctggatctgggacagagggtttgaacagcaatggaattgctcctgggtcatcaaat
tttagccttacaaaacagcttcttcgtccaagaataactcgtgtctgtctcagggacttg
atattctgcatggaacaagagagggagatgaagcattctctaaccttgtaccgtgctctt
ctgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (16)   
   RefSeq(nuc) (12)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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