KEGG   Gallus gallus (chicken): 421202
Entry
421202            CDS       T01006                                 
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
  KO
K10606  E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Pathway
gga03460  Fanconi anemia pathway
gga04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    421202 (FANCL)
  09124 Replication and repair
   03460 Fanconi anemia pathway
    421202 (FANCL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    421202 (FANCL)
   03400 DNA repair and recombination proteins [BR:gga03400]
    421202 (FANCL)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     421202 (FANCL)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    421202 (FANCL)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     421202 (FANCL)
SSDB
Motif
Pfam: FANCL_d3 FANCL_d1 FANCL_C FANCL_d2 zf-RING_2 SLX1_C zf-HC5HC2H zf-rbx1 zf-ANAPC11 zf-RING-like
Other DBs
NCBI-GeneID: 421202
NCBI-ProteinID: NP_001029113
CGNC: 5961
Ensembl: ENSGALG00000030022
UniProt: Q3MUH5
Structure
Position
3:complement(944335..972836)
AA seq 373 aa
MAGRGSLLRQCPLLLPQNREGTAYEGFVSAQGRDFHIRILLPTDSQLKNARIECSWHLKK
ILHGYQHILKQRLHSCPDLVSFVVELKTILEIALKNTQELHVPWPPEYYSCLIRDLEILG
WNKVAYVDTGLTTVKLKAEDSRGRQHLITLKLNAKYPTEPPDCVVDFPVQFAISWMPQDS
LIDIHNQFLAALESLKEFWDTMDEIDGKTWVLEPENPARCATSRRIAIGNNVSVNIEVDP
RHPKMLPECYFLGADHAVNPLRTKLNNNMHLWDPEISLLQNLKDLLEIDFPSRAALEKSD
FTKDCGICYAYRLNGTTPDQVCNEPRCGQPFHQACLYEWLQGLPSSRQSFNVIFGECPYC
NKPLTVKSSMKKP
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcgggtcggggatctttgctccgccagtgtccgctgctgctgcctcagaaccgcgag
gggacggcctatgagggcttcgtcagcgcgcagggtagagacttccacatccggatactg
ttaccaacagattctcaactgaaaaatgcaaggatagagtgtagctggcacctaaagaag
atactgcatggatatcagcatattttgaaacagaggttgcacagttgtccagatcttgtc
agttttgtggtggagctgaaaactattttggaaattgctttgaagaatacacaagagctg
catgtaccgtggccaccagaatactactcctgtctcatcagagatctagaaatattgggt
tggaataaagttgcttatgtggatactggtctcaccacagtcaagctaaaagctgaagac
tctcgtggtcgacaacatctgatcactctgaagttaaatgcaaagtatcctactgaacca
ccagactgcgttgtggattttcctgttcagtttgccatttcttggatgccacaggactca
ttaatagacatccataatcagttcttggcagcgttagaatcgctgaaggagttctgggac
accatggatgaaattgatgggaagacgtgggtactggagccagaaaatcccgcaaggtgt
gctacttcaagaaggatcgccatagggaacaacgtttccgtgaacatagaggtagatccc
aggcatccaaagatgctccctgagtgttacttccttggagcagatcatgcggttaaccct
ttgagaactaagctgaacaataacatgcacttgtgggatccagaaattagtttattacaa
aacttgaaagacctcttagaaattgattttccatctcgtgctgcattagaaaaaagtgac
tttactaaggactgtggaatctgctatgcctaccgcctcaatggcaccacgccagatcaa
gtgtgcaatgagccccgatgcggacaaccttttcatcaggcttgcctgtatgagtggcta
caaggtcttccttccagcagacagagctttaatgtcatctttggtgaatgtccatattgc
aacaagccactgacagtgaaatcttccatgaagaaaccttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   RefSeq(pep) (21)   
DNA sequence (29)   
   RefSeq(nuc) (21)   
   GenBank (4)   
   EMBL (4)   
3D Structure (2)   
   PDB (2)   
Protein domain (10)   
   Pfam (10)   
All databases (87)   

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