KEGG   Gallus gallus (chicken): 422317
Entry
422317            CDS       T01006                                 
Symbol
HOXCDX1L
Name
(RefSeq) homeobox protein CDX-1
  KO
K09312  homeobox protein CDX1/4
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gga03000]
    422317 (HOXCDX1L)
Transcription factors [BR:gga03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    422317 (HOXCDX1L)
SSDB
Motif
Pfam: Caudal_act Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 422317
NCBI-ProteinID: XP_420293
CGNC: 51700
Ensembl: ENSGALG00000007656
Position
4:12086209..12099053
AA seq 279 aa
MYVSYLLDKETSMYPGPARCSNNNLPVQNFVPAPPYSDYMGYHHVPAPDSHGQPAGAWGP
HYGPQREDWNAYGPCPGPSGTAAAAQLSGSSPGQGSYSPAEYSSLHPAAPGGLPPAGTVG
TQQVSPTNQRHSSYEWMRKTVQSTSTGKTRTREKYRVVYTDHQRLELEKEFHYNRYITIR
RKSELAANLRLSERQVKIWFQNRRAKERKLMKKKMTHFDGSNLGSMQSDSGSVSPMPAPD
QQTHSEMPSSLFPPPPPPAPLPMNGLQHTGNLQQVVASQ
NT seq 840 nt   +upstreamnt  +downstreamnt
atgtatgtgagttaccttttggataaagagaccagcatgtatccaggacctgcaaggtgc
agcaacaacaacctgccagtgcagaactttgtgcctgctcccccctactcagactacatg
gggtatcaccacgtgccagctccagacagccacggacagcccgcgggagcctggggaccc
cactacggcccccagagggaggactggaacgcttacggcccgtgcccagggccctccggc
acggctgctgccgcacagctcagcggctcctctcctgggcagggctcctacagtccagct
gagtacagctccctccatcccgctgcacccggggggttacctcctgcaggcaccgttggc
acacagcaggtctcacccaccaaccaaaggcacagctcttatgaatggatgaggaaaacg
gtgcaatccacttctacaggtaaaacaagaacaagagagaagtaccgagtggtttacaca
gatcatcagagattagaattagagaaggaatttcattacaacagatacattacaatcagg
aggaagtctgaacttgctgcaaacctaagactttccgagagacaggtgaaaatctggttc
cagaatcgcagagccaaagaaagaaaattaatgaagaagaaaatgactcattttgatggc
agcaatcttggctctatgcagagtgactctggctcagtgagcccgatgccagctcctgac
caacagactcactcagaaatgcccagctctttgttccctcctccacctcctccagctccg
cttccgatgaatggcctgcagcacactgggaacctgcagcaggtggtggcctctcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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