KEGG T01006: 423389

Gallus gallus (chicken): 423389

Entry

423389            CDS       T01006

Symbol

GTF2A1

Name

(RefSeq) transcription initiation factor IIA subunit 1

K03122

transcription initiation factor TFIIA large subunit

Organism

gga Gallus gallus (chicken)

Pathway

gga03022

Basal transcription factors

Brite

KEGG Orthology (KO) [BR:gga00001]
09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    423389 (GTF2A1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    423389 (GTF2A1)
Transcription machinery [BR:gga03021]
Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     423389 (GTF2A1)

SSDB

Motif

Pfam:

TFIIA DUF2436

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

CGNC:

Ensembl:

UniProt:

A1IIE6 A0A8V0XRG3 Q5F3E1

Position

5:complement(40330784..40357128)

AA seq 377 aa
MASSTNTNPVPKLYRSVIEDVINDVREVFLDEGVDEQVLMELKTLWENKLMQSKAVDGFH
SEEQQLLLQVQQQQQQQQQQQHHHHHHHTQPQPQQTVQQQTQPQQVLIPASQQAPQQQVI
VPDSKLIPHMNASGMSAAATAATLALPAGVTPVQQILTNSGQILQVVRTANGAQYIIQPQ
QPVVLQQQVIPQMQPGGVQAPVIQQVLAPIPGGIPQQTGVIIQPQQILFTGNKTQVIPTT
VAAPTPAQAQIPAAGQQQPQQQQAQPQAPLVLQVDGAGDTSSEEEEDEEEDYDDDEEEDK
EKDGGEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMN
LNGRDYVFSKAIGDAEW

NT seq 1134 nt +upstreamnt +downstreamnt
atggcgagctcgactaacacaaaccccgtgcctaaattgtacaggtctgtaattgaagat
gtcattaatgatgtcagagaagtttttctggatgaaggagtggatgaacaagttctcatg
gaactcaaaacactgtgggagaacaagctgatgcagtccaaggctgtagatggcttccat
tcagaagagcagcaacttctgttgcaggtgcaacagcagcaacagcaacagcagcaacaa
caacatcaccaccaccaccatcacacacaacctcagccgcagcagactgtgcagcagcag
actcagccacaacaggttcttattccagcatctcagcaagcacctcagcagcaggttatt
gtgccagattccaagctgataccgcacatgaatgcatcgggcatgagtgctgcagccact
gcagctacattggctctccctgctggcgttactcctgttcagcagatacttacaaattca
ggccagatcctccaagtagttagaactgcaaatggagctcagtatatcattcagccacag
cagccagttgttctacagcagcaggtcataccgcaaatgcagcctggtggtgtacaagca
cctgttatacagcaggttttggctccaattcctggagggattcctcagcagacaggagtg
attattcagcctcagcagatcctgtttacaggaaataaaactcaagttatacctacaaca
gtggctgcccctacaccagctcaagcacagattcctgcagctggtcagcagcagccacag
caacaacaggcacaaccacaagcaccacttgttctccaagttgatggagcaggagacaca
tcatctgaagaagaagaagatgaggaagaagactatgatgatgatgaagaggaggacaaa
gaaaaagatggaggtgaagatggccaggttgaagaggagcctcttaacagtgaagatgat
gtgagtgatgaggaaggacaagaactgtttgatacagaaaatgttgttgtgtgtcagtat
gataagatccatagaagtaaaaacaaatggaaatttcatctcaaggatggcatcatgaat
cttaacggaagagattatgtattttccaaagccattggggatgcagaatggtga

All links

Gene (11)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (3)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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